Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00599 ATGGGTTGTTTTCCATTTTTTGGATCATCCAACAAAAATGCTGACTTCGTTTACTCCACAAGGATTTTCCCAGATAGATATAAGTTTGCTCCAAACGATAAGTCACTACAGAATATTAAAGCACCTAAATTTACATTGGAAGAGCTTGAAGCTGCTACCAAGAATTTTGGTCCAGAATGTTTATTAGGTGAAGGAACTTTGGGGCGTGTATTCGAAACTCACCTTGATAGCATTAACAAAGTAGTTGCTGTGAAACAACTTGACCCAAATAACTTCAAAGGAAATAGAGAATTTTTGGTGAAGGTTCTGAGGCTAAGCCTCTTACATGACAAAAATCTAGTGAACTTGATTGGTTACTGTGCTGATAACAATCAAAGGTTACTAGTTCAGGAGTTTATGCCATTTGGGTCATTAAAGAGTCATATAAACAAGATGCCACTAGATTGGAACAAAAGGATAAAAATAGCATTTGAAGTAGCAATGGGTTTGGATTACTTGCATAACAAGACATCTCCCCCTTTAGTACATGGAGACTTAAAAGCATCCAATGTTCTCTTAGATGAAGATTATAGTGTCAAGTTATCAGATTTTGGGTTAGCAAAACTTGGACCAGAAGATGAAAATGGACCGAATCGATTCACGggaacaattggttattgtgcccctgaatttgttatcacaggagaaacaactatgatgtctgatgtatacagctttggagtaatcttccttcaacttatctcaggaagagaggCTTTTGATCTAACACGTCCCATCCATGAGAGAAATATTGTTGTATGGGCACAATCTCTTTTGGGCAACCGTAAGAACTTCAGCAAAATAGTTGACCCTCTACTGAAAGGTTATCCATTGCGAGGATTTCATCGAGCACTTGCCATTATAGGAATGTGTTTGGTAAAAGAACCTTCTAAAAGGCCTGTCATTGGTGATATTGTGGTTGCTCTTACATTGGAGTTCAACATGAAGTATAATGACCAAATTGATCATTCTGATCCTCATTATGAGAAGACTAGAATAGTAGCCCCACATAGGAAGATGTATTATGATTGA 1071 0.3333 MGCFPFFGSSNKNADFVYSTRIFPDRYKFAPNDKSLQNIKAPKFTLEELEAATKNFGPECLLGEGTLGRVFETHLDSINKVVAVKQLDPNNFKGNREFLVKVLRLSLLHDKNLVNLIGYCADNNQRLLVQEFMPFGSLKSHINKMPLDWNKRIKIAFEVAMGLDYLHNKTSPPLVHGDLKASNVLLDEDYSVKLSDFGLAKLGPEDENGPNRFTGTIGYCAPEFVITGETTMMSDVYSFGVIFLQLISGREAFDLTRPIHERNIVVWAQSLLGNRKNFSKIVDPLLKGYPLRGFHRALAIIGMCLVKEPSKRPVIGDIVVALTLEFNMKYNDQIDHSDPHYEKTRIVAPHRKMYYD 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00599 356 SUPERFAMILY Protein kinase-like (PK-like) 36 328 IPR011009 -
Car07g00599 356 Gene3D Phosphorylase Kinase; domain 1 41 132 - -
Car07g00599 356 SMART serkin_6 56 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00599 356 Coils Coil 356 356 - -
Car07g00599 356 PANTHER OS07G0668900 PROTEIN 29 336 - -
Car07g00599 356 PANTHER OS07G0668900 PROTEIN 29 336 - -
Car07g00599 356 Pfam Protein kinase domain 61 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00599 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Car07g00599 356 ProSiteProfiles Protein kinase domain profile. 56 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00599 356 Gene3D Transferase(Phosphotransferase) domain 1 133 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00599 Car-Chr7 5234997 5237350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00599 38 322 Glycoside Hydrolase AT3G07070 52.560 3.40e-108 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Car07g00599 Pkinase 6.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00599 - - cam:101503660 728.013