Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00591 ATGTGTCTAACACTACTTCAAAGGAACACATCACCACCTTGTAGTGGTGAAAAAAGAGGAAGAAGGAAACAAACAGAACCAGGTAGGTTTCTTGGTGTAAGAAGAAGACCTTGGGGTAGATATGCTGCTGAAATTAGAGACCCTACAACTAAAGAAAGACATTGGCTTGGTACTTTTGATACTGCTCAAGAAGCTGCTCTTGCTTATGACAGAGCTGCTATTTCCATGAAAGGAAATCAAGCTAGAACTAATTTCATTTACTCTGATCATAGTACTATCAATTTTCATACACTTGTTTCTTCTCCTATCAATCATGTTCAACTTCAAGTTCAGCCTCTCTTGCAACCCTCACAAATTCTTAATAACACTATTACTACTCAAACAAAACAACAAATCAATCAAAATAGCTTTTCTCATCACCTTAACAATGAAAACCTCTCTACATTGAACAATGACATGATTGTGAGTGTTGATAATGAAAAAACAACAAATAAATCATCAGCTCATTCTCATGATGATAATTTCTTCTTTTCAAGTGATTCTTCTAACTCTGGCTATCTTGAATGCATAGTTCCTGATAACTGTTTTAATCCTGCTTCTTCTAACCGTTCAAACTCAAGAAACAGCAATGTAAGTGTTTCAAGTGATCAAAAATTTACATCTAAGGTTGAAAGTAACCAAGTTTCAATGGAGGGTCAATCACATTTTGGCATTActtctttttctgaagaaatgccatcaagggtctctaacttttctaattattatccgagtgatgaaattatcggTCAAGAATTTTGGGATTGGAACTCAAGTGAACTTTCAGCTATATTTAACAACAACTCATTAAGTGTTGAAGATGAATGCTGCATGGATACAACATTTTATCCTAATTATCCTATGATGATTGAAGCTCTAAGTCCAAGCTATGGAATAATGAATGAACAAGCTGCTTCTTCAACTAATTGTTCTCCATCACTTGATTTGGGATACAATCTCTTTTGA 1005 0.3214 MCLTLLQRNTSPPCSGEKRGRRKQTEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAAISMKGNQARTNFIYSDHSTINFHTLVSSPINHVQLQVQPLLQPSQILNNTITTQTKQQINQNSFSHHLNNENLSTLNNDMIVSVDNEKTTNKSSAHSHDDNFFFSSDSSNSGYLECIVPDNCFNPASSNRSNSRNSNVSVSSDQKFTSKVESNQVSMEGQSHFGITSFSEEMPSRVSNFSNYYPSDEIIGQEFWDWNSSELSAIFNNNSLSVEDECCMDTTFYPNYPMMIEALSPSYGIMNEQAASSTNCSPSLDLGYNLF 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00591 334 MobiDBLite consensus disorder prediction 1 30 - -
Car07g00591 334 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
Car07g00591 334 SUPERFAMILY DNA-binding domain 30 87 IPR016177 GO:0003677
Car07g00591 334 CDD AP2 29 85 IPR001471 GO:0003700|GO:0006355
Car07g00591 334 Pfam AP2 domain 32 78 IPR001471 GO:0003700|GO:0006355
Car07g00591 334 Gene3D AP2/ERF domain 29 87 IPR036955 GO:0003700|GO:0006355
Car07g00591 334 MobiDBLite consensus disorder prediction 15 30 - -
Car07g00591 334 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF086 1 327 - -
Car07g00591 334 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 327 - -
Car07g00591 334 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Car07g00591 334 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Car07g00591 334 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Car07g00591 334 MobiDBLite consensus disorder prediction 200 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00591 Car-Chr7 5181528 5182594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00591 1 292 AP2-EREBP Transcription Factor Family AT5G18560 40.303 5.51e-55 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car07g00591 AP2 1.9e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00591 - - cam:101500468 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00591 07 5181528 5182594 Car01g00535 01 4310789 4311712 PCT