Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00589 ATGCCCCCGATTTCATTTTGTCACGCCAGCAAAAAAAAGAAGAAGACAAATCCCTCCCCCAAATCTAGTTTCTCTTTCATCCATCGGGCTTTTCTTCGTTTTCGATTCCCAATTTCAATTCCGCGTTATTACTTTCCGCTTCTCAGATCAAAGACTTTCATCTTCTGGGTTTTGAACCTACAATCAAGGAAATCAGTCATGGGCCCTACCAGGAAATCTAGAAGTGTAAATAAGAGGTTCTCTAATATTCGTGAGGCTGCATCTAGTAAAGATAAAGATGCAGCAAATACTGGCAAGAATAGGAAGAAGGCGAGTCCTGGTATTCCGAAGAAGAGAAAATTGGCCGACATGTTAGGGCCACAATGGAGTAAGGAGGAGCTTGAACGTTTCTATGAAGCTTACCGTGAATATGGGAAAGACTGGAAGAAGGTTGCTATTGCAGTACGTAATAGGAACATGGAAATGGTAGAAGCCTTGTACACTATGAACAGGGCATACTTATCTCTTCCAGAGGGCACTGCTTCTGTTGTTGGACTGATAGCAATGATGACAGATCACTATAGTATACTGGGAGGAAGTGACAGTGGAAAAGAAAGCAATGAAGATGCAGAAATATGTAAAATGTCTAAAAAACGTCCACGGGGAAAACATCCAAATGACAATAACCCACTAGATGGAAACTTTTCAGATCATTCTCAGCCACATTCTGTTGCATCAGATGATGGCTGTCTGTCATTGTTGAAGAAGAGGCATTCTGGAATTAGGCCTCATGCTGTTCGAAAAAGAACTCCCCGTGTCCCTATTTCATATTCTATTGGCAAAGATAATGGGGGGAAGTTTTTTTCATCTGCTAGGCAGGACTCCAAACAAATGGTTGATACAAATGATGTCACTCATAAAATTGCATTAGCATTGGCAGAGGCTTCACAAAGAGGTGGTTCTTCAAAAGTTTCTGGATCGCCAAACAAGAAAAACATGCCATCACCCAATCTGAAAATTGGGAAGAAGCATGTTAAATCAGAAATAGTCGGGGCCAAGTTTTGCAACTCTCGCATGGATGAGGGTAGTTCTGAGTTGAGTTTAGGAAGCACAGAAGGTGATAATGGAGATTATTCTAGAAAATTAATTCAGCGAAGTGGTAGAGAAAATACTGGAAGAGGAAGGAATCAGGAAAAGGGAACAAAACACTACAGAAAGAACTTAGAACCTGAGGAAAATATAAACAAACATTTGAATGGCATAAAGGAGGCCTCCAGTGGGACCGATGATGGTAAAAATCAGAGTTCCTTCAAATCCTGTTTTGACACAGATTTTGCAAATGCAAAAAGTGCGAGGTCTTCTTACAAGGGTCTTAGAAAGAAAAGTAAAAAAATACTTTTTGAGAAAGATGAAGGTTCCGCATTCGATGCTCTGAAAACTTTGGCTGATCTTTCTTTGATGATGCCAGCAACAAACCCTGACACTGAGTCATCTGTGCAGTTCAATGAAGGAAACTGTGATGTGGTTGATGAGTCTAAAATGGAAACAGATAATGGAAACAGTTCAAGAAAATCAGGCAAGGTTTTTTCTGATAAAGCAGCTGCTGCTCCCGAAGTAAAGGGAGTGTACCAGTTTAATGCAGGAAGCAGGAAAAGAAAACAAAAATCGTTTACCTCAAAAAATGATGAAACACATACTGATTCTCATTTAAGTGGTTCCCAGAAAATAAAGGTTACTGATGAGGTGAAGAAGTCCATGGTTAAAGGCAAGCGATCATCTGTCAGTACAGCGCATTCCAGACAACTAAAAATGGTGAAATCCATAGGAAATATGTCTTCAAATATTAACGACAAAATAGAAATGGATGATTCATCTTTTTCCCCCATAAAAGCTTTGTCTACTAACCAAGTCGGTCAAGTAAACAAAGACCGACCTAGAAGAAAGATGGAAAAACCAAAAGCAATGGTACAAGATCCTACAATGTCTGAAAATATTTTTAGCAGTCAACATGATAAGTCCATTGCTACATACTGGTGGAATAGTTTTGAATGTCAAAAGGCACAGGTAAAGCTTATTAATTGTCTGTCTTCATATCAAATGCGGAGATGGTGCACCTCTGAATGGTTTTATAGTGCTATTGACTATCCATGGTTTTCAAAGAGAGAGTTTGTAGAGTACTTGGACCATGTTGGACTGGGTCATGTTCCCAGATTGACTCGTATTGAGTGGGGAGTCATTAGAAGTTCTCTTGGTAGACCACGGAGATTTTCAGAGCAATTTTTGATAGAAGAAAAACATAAACTTAATCAGTACAGGGAGTCTGTCAGATCACATTATGCTGAAGTTCTTGCTGGTACCAAGGAAGGCCTGCCTGTTGATTTGGCCCAGCCATTAATAGTTGGGCAGCGTGTTATTGCTATTCATCCAAAGACTAGGGAGATTCATGATGGAAGTATACTGACTGTGGACCATTGTAGATACCGGGTTCAATTTGACCAACCTGAACTTGGAGTTGAGTTTGTCATGGATATTGACTGCATGCCTTTGTATCCATCTGAAAATATGCCCATGTCTCTCATACGACACCATATCACTCCTGCTAGAATAAATGAGAACCTTAGTGAGCTTACCCGTAATGGGAAACCAACACAAAGAAAGATCTCCGAGCACACAATATTGTCTGCAAGTGAGAACTCAGATGCCATTAAAGGTCTCTGTATACCACCTGCTATGCATGTTACTGGTACTTTGTCAAAACAGGGGTTTTCTTCAAGTTGCAAATCACAAGCAAAAGTTGTGTGCAGTGAGATTTGTAATGGCCAATCAGCATCAAGTTCTCAGTCTCCCCTTCTTGAACGTGTCCATTCAAAAGAAGCTGATATATTAGCTATTTCCGAATTGACTCGTGCTCTAGACAAAAAGGAACTTGTGTTGTCTGAACTGAAGCACATGAATGACGGTGTATCAGAAAGCCAGAAATACGGAGACAACTCGGTGAAGGATTCAGAACCTTTTAAAAGGAATTATGCTTCAGTACTTAAGCAATTAACTGAAGCAAATGAACAGGTTTCTTCTGGCTTGTTTTGCTTGAGGCAACGTAATGCATATCAAGCAAGTTCCTCAGTTTTGTCATTGAAGCCCATGGCAAATTTTGATGATCCTGGTGGTCAGGCTAGCTCTTCCAATTGTTCAGTTTGCCACAACCAAGAATCTATATCTCAAAGTCATATAGCTGATATTGTTGAAAGTTCAAGAAGAAAAGCCCAAACCATGGTTGTTCAAATTACTCAGGCAATATCTGATTTTAGAAAGACAGAAAGTAAGGTTGAAAGAATCGAAGATGCAATAAATTTTGTCAATAATCGGCTTTCAGCCACAAATTTTCTGCCCATGGATTCAATTACTTTAGCTTCTCAGGATCAATTGACTGCCGGCAGCATATTAAACCGCTTGGCAAGGTGCCATGTACAAGATGCCGAACTTAACAGTTCATCTGACCAAAATGAAATGAAAATTCCCTCAGAACTCATATCTCATTGTCTAGCTACACTGCTCATGATTCAGAAATGTACGGAACGACAATTTCCCCCAGCTGATGTTGCTCAGGTACTAGATTCTGCTGTCACCAGTTTGCAGCCATTTTGTTCAAAGAATCTTCCAATATATGGTGAGATACAGAAATACATGGGTATCATAAGAAATCAGATATTGGCGCTCATACCTACCTAG 3708 0.3991 MPPISFCHASKKKKKTNPSPKSSFSFIHRAFLRFRFPISIPRYYFPLLRSKTFIFWVLNLQSRKSVMGPTRKSRSVNKRFSNIREAASSKDKDAANTGKNRKKASPGIPKKRKLADMLGPQWSKEELERFYEAYREYGKDWKKVAIAVRNRNMEMVEALYTMNRAYLSLPEGTASVVGLIAMMTDHYSILGGSDSGKESNEDAEICKMSKKRPRGKHPNDNNPLDGNFSDHSQPHSVASDDGCLSLLKKRHSGIRPHAVRKRTPRVPISYSIGKDNGGKFFSSARQDSKQMVDTNDVTHKIALALAEASQRGGSSKVSGSPNKKNMPSPNLKIGKKHVKSEIVGAKFCNSRMDEGSSELSLGSTEGDNGDYSRKLIQRSGRENTGRGRNQEKGTKHYRKNLEPEENINKHLNGIKEASSGTDDGKNQSSFKSCFDTDFANAKSARSSYKGLRKKSKKILFEKDEGSAFDALKTLADLSLMMPATNPDTESSVQFNEGNCDVVDESKMETDNGNSSRKSGKVFSDKAAAAPEVKGVYQFNAGSRKRKQKSFTSKNDETHTDSHLSGSQKIKVTDEVKKSMVKGKRSSVSTAHSRQLKMVKSIGNMSSNINDKIEMDDSSFSPIKALSTNQVGQVNKDRPRRKMEKPKAMVQDPTMSENIFSSQHDKSIATYWWNSFECQKAQVKLINCLSSYQMRRWCTSEWFYSAIDYPWFSKREFVEYLDHVGLGHVPRLTRIEWGVIRSSLGRPRRFSEQFLIEEKHKLNQYRESVRSHYAEVLAGTKEGLPVDLAQPLIVGQRVIAIHPKTREIHDGSILTVDHCRYRVQFDQPELGVEFVMDIDCMPLYPSENMPMSLIRHHITPARINENLSELTRNGKPTQRKISEHTILSASENSDAIKGLCIPPAMHVTGTLSKQGFSSSCKSQAKVVCSEICNGQSASSSQSPLLERVHSKEADILAISELTRALDKKELVLSELKHMNDGVSESQKYGDNSVKDSEPFKRNYASVLKQLTEANEQVSSGLFCLRQRNAYQASSSVLSLKPMANFDDPGGQASSSNCSVCHNQESISQSHIADIVESSRRKAQTMVVQITQAISDFRKTESKVERIEDAINFVNNRLSATNFLPMDSITLASQDQLTAGSILNRLARCHVQDAELNSSSDQNEMKIPSELISHCLATLLMIQKCTERQFPPADVAQVLDSAVTSLQPFCSKNLPIYGEIQKYMGIIRNQILALIPT 1235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00589 1235 Pfam DIRP 701 802 IPR033471 -
Car07g00589 1235 SMART DIRP_2 702 803 IPR033471 -
Car07g00589 1235 Gene3D - 60 174 - -
Car07g00589 1235 MobiDBLite consensus disorder prediction 208 240 - -
Car07g00589 1235 MobiDBLite consensus disorder prediction 67 110 - -
Car07g00589 1235 SMART sant 118 166 IPR001005 -
Car07g00589 1235 MobiDBLite consensus disorder prediction 548 571 - -
Car07g00589 1235 Pfam Myb-like DNA-binding domain 121 154 IPR001005 -
Car07g00589 1235 MobiDBLite consensus disorder prediction 84 99 - -
Car07g00589 1235 MobiDBLite consensus disorder prediction 311 327 - -
Car07g00589 1235 MobiDBLite consensus disorder prediction 1 22 - -
Car07g00589 1235 Coils Coil 957 977 - -
Car07g00589 1235 MobiDBLite consensus disorder prediction 352 395 - -
Car07g00589 1235 MobiDBLite consensus disorder prediction 222 239 - -
Car07g00589 1235 MobiDBLite consensus disorder prediction 371 395 - -
Car07g00589 1235 CDD SANT 122 156 IPR001005 -
Car07g00589 1235 Coils Coil 1095 1115 - -
Car07g00589 1235 MobiDBLite consensus disorder prediction 67 83 - -
Car07g00589 1235 PANTHER LIN-9 67 1235 IPR010561 GO:0006351|GO:0017053
Car07g00589 1235 SUPERFAMILY Homeodomain-like 118 165 IPR009057 -
Car07g00589 1235 PANTHER PROTEIN ALWAYS EARLY 1-RELATED 67 1235 IPR028306 -
Car07g00589 1235 MobiDBLite consensus disorder prediction 308 332 - -
Car07g00589 1235 MobiDBLite consensus disorder prediction 627 649 - -
Car07g00589 1235 MobiDBLite consensus disorder prediction 537 571 - -
Car07g00589 1235 MobiDBLite consensus disorder prediction 353 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00589 Car-Chr7 5144818 5162543 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Car07g00589 DIRP 6.9e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00589 - - gmx:100781646 1798.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00589 07 5144818 5162543 Car07g00589 07 5144818 5162543 ECH