Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00584 ATGCTGATTCGAAAACTCCACAGTGCCACCCACAAACCCCTCAAAGCTATGCTCTTCACAAAACCTTCTCTTCTATTCAAACTTCAACAACTCCAACGCTATCCATCAATTTCATTTTTCAATTTCTTCTGCACTTCCACCTTCGATCCACAATCTTTCACCGTCTCTTACCTCATCAACAATTGTGGCTTCTCCCCTCAAACCGCACTCAAAGCTTCCCAAAAAATTACTCTCCACAACTCCCAAAAGCCCGATTCAGTTCTCCACTTCCTCAAAACCCACGGTTACTCCAACTCTCAAATACATGATATCCTCAGAAGGGAACTATGGATACTCTCTTGCGACCCCAATAAGGTAATTTTACCAAAGTTTCAATTTTTTCTTTCAAAAGGTGTTTCTTCCTCTGAAATTGCTCACATGGTGATTGTTAGCCCTAGAATCCTCAGAAGAAGTTTGCAAACTCATATAATCCCTACTTTTGAATTTGTAAGAACCTTCCTTGAATCTGATAAACAAACCATTGCCTGTATGAATCGTTTTCGTTTTGTTTGTTCTGATCGTGTGATTAATAATGTGAAAATGTTGATTGATGGTGGAATGTCCAAATCCAAAATTGCTATGTTGTTTCGTATTTGGCCTAGGATATATTGCTCTTCCACCCTGATGAAGACTGTTGAGGAATTGAAACAATTGGGTTTCAATACTTCAACTGCTTCTTTTGGGGTGGCATTGCTTGCCAAGATAAGTGTCACCAAAACCAAGTGGGCTGAGAAAGTTGAAACCTTTAAGAAATGGGGTTGGTCTGATCAACATATTATTTATGCTTTTAAGAAGCAACCTTTCTGTATGTTATCATCCACTCATAAAATCAATGCAGTCATGAGTTTTTGGGTTGATAGCTTAGGTTGGGATTCTTTGGACCTTGTCAGTGCTCCTGTAGTTATTCAATGCAGTCTTGAGAAGAGGGTTATTCCAAGGGCTGCAGTTCTGCAGTTCCTTGTATCTAAAGGTTTGAGAAAAAAGGATGCGGCGTTATCGGAACCATTTTCTATTCCAGAGAAGTTGTTTCTGAAGAAGTTTGTGACATGTTTTAAAGACGATTCTTCTCATCTGTTGAAGCTGTATGAGGAAAAAATGAATCTTGCAAATAACATGGAGAAGTCTTCATCAAGTATGTAA 1179 0.3885 MLIRKLHSATHKPLKAMLFTKPSLLFKLQQLQRYPSISFFNFFCTSTFDPQSFTVSYLINNCGFSPQTALKASQKITLHNSQKPDSVLHFLKTHGYSNSQIHDILRRELWILSCDPNKVILPKFQFFLSKGVSSSEIAHMVIVSPRILRRSLQTHIIPTFEFVRTFLESDKQTIACMNRFRFVCSDRVINNVKMLIDGGMSKSKIAMLFRIWPRIYCSSTLMKTVEELKQLGFNTSTASFGVALLAKISVTKTKWAEKVETFKKWGWSDQHIIYAFKKQPFCMLSSTHKINAVMSFWVDSLGWDSLDLVSAPVVIQCSLEKRVIPRAAVLQFLVSKGLRKKDAALSEPFSIPEKLFLKKFVTCFKDDSSHLLKLYEEKMNLANNMEKSSSSM 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00584 392 PANTHER CGI-12 PROTEIN-RELATED 28 384 IPR003690 GO:0003690|GO:0006355
Car07g00584 392 Gene3D Transcription termination factor 3, mitochondrial 169 368 IPR038538 -
Car07g00584 392 Pfam mTERF 187 356 IPR003690 GO:0003690|GO:0006355
Car07g00584 392 Pfam mTERF 88 177 IPR003690 GO:0003690|GO:0006355
Car07g00584 392 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 28 384 - -
Car07g00584 392 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
Car07g00584 392 SMART mt_12 305 339 IPR003690 GO:0003690|GO:0006355
Car07g00584 392 SMART mt_12 102 133 IPR003690 GO:0003690|GO:0006355
Car07g00584 392 SMART mt_12 138 169 IPR003690 GO:0003690|GO:0006355
Car07g00584 392 SMART mt_12 206 234 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00584 Car-Chr7 5100772 5103011 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Car07g00584 mTERF 3.9e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00584 K15032 - gmx:102667698 382.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00584 07 5100772 5103011 Car01g01033 01 9887886 9892057 PCT