Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00563 ATGGAGGACCCTCAGTATCCAAACAACCCTCATCCTCCAACCTATCAACAACATTCCGTTCCCAAACCGCCATCGCAGCATTCCGAAAATGATCAAACTACCGCAGAATTGCGTGCTCTCGATTGCAACCTCGCTTCTCTCTGCGAGCATGTTCAAATTGAAGGTTTCAATTCCGGCTCTTTCTCCGATATCGTCGTCGATGCAATGGGCTCCACTTATCGCCTCCACCGTCTCATCCTCTCCCGCAGTTCATATTTCAGGAACATGCTTCATGGTCCATGGAAAGAAGCTAGTGCTCCTATTGTGACCTTGAATATTGATGATAAGAATGTTAATGATGAGGCTATTGCAATTGCTTTAGCATATCTATATGGGAACCACCCTAAACTTAATGATAATAATGCATTTCGTGTCCTTGCTGCTGCTTCATTTCTCGACCTTCAGGATTTATGTGCTATATGTACGGATTTCATAATATCTGAGCTGTGGACCTCAAACTTCTTGGCTTATCAGGTGTTTGCAGAGAACCAAGATTATGGCATTCATGGGGAGCGTGTTAGAACTGCTTGTTGGGGCTACCTTTGTCAAAGTGGTGGCATGGAATTGAAAGAGGTGCTTCCTAAACTTTCATCTCATACCTTACATGCTTTACTGACCTCTAATGACCTGTGGATACCCTGTGAAGAGAAGCGGTTTGAATTGGCTTTGCACACAATCCTGGCAAAAAGTGCTCACTGCAATATTGAACATCCTGCACATGGAattcctggttctgagtctgcaactggcattcattctgattctgatAACACCAAGGGAAAAGGTATAACTGATAGCTGCACTAACAAGAGATTGGAAACTGACTTGGGGAAAATGAGTCTTAAAAGTGGTCCAAAGGACCCTACCACACCAAATCGTCTAGTTGAGCTTGCAGACTCGGTAATAGACTTCAAAAATGAGGTTTCTGATTCCAATCAACGCGTTCAACTTGCTTCACATGTCAGTTCAGAAAATTTGAATCCAAGATATCCATGTGACATGCAAGGGCCTTCATTGTCTGGTACAGATGGGGTGAGAACATCATGTTATGTTGAGGTGCCTCTTGGTGCTGGAGCAACTACTGGAGTGGGCATTGAAGGGCCATCTGAGGAAGGATCTTGCTACCATTCGGATAACAACAATAGGTTGGTCAGGGATCAATCAAGACATTGTTTTTCTTCGAGTTCTTGTAATGAGCTCACATCCAGTGAGTGGGGAAGATATGGGACACCTTTGCTTTCATGTGGTGGCCATGTTGGCAGAAGACAGGTCAAAGCTCATTACAGAGGAAACTATGGATCTCATGGAGATGAATATGATGTATTTTTTAATATATTTGAAGGGGGCTCACTTTTATATTGCAATATGTCTTTTGATGCACTTCTAACTGTCAGAAAGCAGCTTGAAGAGTTAGGATTCCCTTGCAAAGCTATAAATGATGGTCTTTGGTTGCAGATGCTTCTCAGTCAGAGGGTACAAGAGATTGCTGCTGATACATGCAGAGGGTGTTCCCTTATGACTATGTCTTGTACTTGCCATAAGCAGTTTGCATTTTTACATGGATCTACTACCACTGGATCTTACGTGCAAGAATACAATCATAACAATATGCCTGGGGGTGTAGGAATATATGTTGCTGAATCTTCTACAGGCGAAAGAAATGGCCCTTTTAGACCTGTACGAGTGCATGTTAGAGGTGCTAATGCTATTGATGGGCTTGCAGGTATTGGCCGTGGAACTACATTTGTTCCTGCAGCTGCTTCACCTCCTACACGATTTGTCTTTTCTCGTGTACCATTTGGCGTTGGCAACAGAAACTACCTTCAATCTGCAGCCAATGATGATTCAGAGACACGTGCTGATCACAATGGAGACCTGTCTGGAGATGGATTGACAGCTTTAGTTGGGTTAAGCCAAGGAGGGAGTAGTGGTTCAAATGTACATACAGAGCTAACAAAAAGGGGACATGAAATGGGCTTGCAAAGTACTGCTGGGGGTGCAAGTACTGGCGGCATTCCCACACCGGAACATACCATTGGTATAGAATGGGAAAATGACAGCAGTTCTTCTATATCATTGGATTTGAAAACACCTTTAAGTCATTTCCCCCCTTTTCGCTTTGGTGTAAGTTTTGAGGAAGTGCACAGGCTTGGTGATGGCCAGGTCAAGCATTCTCCAGAAGTTTTCTATGCCGGTTCTTTATGGAAGGTCAGTGTACAGGCTTTTAATGATGAAGACCCCCAGGGACGGCGCACCCTTGGGTTGTTTCTTCACCGTCGGAAAGCAGAAATAGCCGATGTGCACAGGAAGGTACATATGTATGTTGACTCGCGTGAAAAGGTGACTGCACGGTATCAGTTGACTTGCCCATCCAAGAGGGAAATGTTGGTGTTTGGAAGCTTTAAACAAACAGGCACTCTTTTACCCAAGGCTCCTAAAGGATGGGGTTGGCGAACTGCTCTGCTATTTGATGAACTTGCTGATATTCTACAAAATGGGGCCCTAAGGGTTATTGCTGTAGTGCAGCTTGTTTGA 2574 0.434 MEDPQYPNNPHPPTYQQHSVPKPPSQHSENDQTTAELRALDCNLASLCEHVQIEGFNSGSFSDIVVDAMGSTYRLHRLILSRSSYFRNMLHGPWKEASAPIVTLNIDDKNVNDEAIAIALAYLYGNHPKLNDNNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRTACWGYLCQSGGMELKEVLPKLSSHTLHALLTSNDLWIPCEEKRFELALHTILAKSAHCNIEHPAHGIPGSESATGIHSDSDNTKGKGITDSCTNKRLETDLGKMSLKSGPKDPTTPNRLVELADSVIDFKNEVSDSNQRVQLASHVSSENLNPRYPCDMQGPSLSGTDGVRTSCYVEVPLGAGATTGVGIEGPSEEGSCYHSDNNNRLVRDQSRHCFSSSSCNELTSSEWGRYGTPLLSCGGHVGRRQVKAHYRGNYGSHGDEYDVFFNIFEGGSLLYCNMSFDALLTVRKQLEELGFPCKAINDGLWLQMLLSQRVQEIAADTCRGCSLMTMSCTCHKQFAFLHGSTTTGSYVQEYNHNNMPGGVGIYVAESSTGERNGPFRPVRVHVRGANAIDGLAGIGRGTTFVPAAASPPTRFVFSRVPFGVGNRNYLQSAANDDSETRADHNGDLSGDGLTALVGLSQGGSSGSNVHTELTKRGHEMGLQSTAGGASTGGIPTPEHTIGIEWENDSSSSISLDLKTPLSHFPPFRFGVSFEEVHRLGDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEIADVHRKVHMYVDSREKVTARYQLTCPSKREMLVFGSFKQTGTLLPKAPKGWGWRTALLFDELADILQNGALRVIAVVQLV 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00563 857 SMART BTB_4 62 162 IPR000210 GO:0005515
Car07g00563 857 MobiDBLite consensus disorder prediction 1 19 - -
Car07g00563 857 MobiDBLite consensus disorder prediction 251 282 - -
Car07g00563 857 MobiDBLite consensus disorder prediction 261 278 - -
Car07g00563 857 Pfam BTB/POZ domain 56 160 IPR000210 GO:0005515
Car07g00563 857 ProSiteProfiles BTB domain profile. 62 132 IPR000210 GO:0005515
Car07g00563 857 MobiDBLite consensus disorder prediction 1 32 - -
Car07g00563 857 Gene3D Potassium Channel Kv1.1; Chain A 29 195 IPR011333 -
Car07g00563 857 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 21 857 - -
Car07g00563 857 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 21 857 - -
Car07g00563 857 SUPERFAMILY POZ domain 56 160 IPR011333 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Car07g00563 BTB 2.8e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00563 - - gmx:100806711 1424.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00563 07 4926580 4931894 Car07g00563 07 4926580 4931894 ECH