Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00549 ATGGCTGAATTTGATAACAGTCAGCATGAGAAGAAGAAGAAGTACGCCGTTGTTGGTTTATCTTCAATCTTACTTGTCGCCATGGTAGCCGCTGTGGCCGTCGGCGTATCAACCACCGACGAAATTAGCGGCGAATCAGGCGGCGACAACCAATTAGCAACATCACAAAAGAATGTTAAAGTTATCTGTGATTCAGCAGAGTACAAACAAACGTGTGAAAAGAGTCTTGCAAATGTTTCATCAGAAACCACTGACATGAAAACATTGGTGATAGCAGCTTTCAATGCAACCGCTGAAGAACTCTTAAGCAAAATCCACAACTCAACACTTTACAATGAATTAGCCACTGATAACATGACAAAACAAGCCATGGATATTTGCAAAGAAGTCCTTGGTTATGCTGTTGATGATATTCATCAATCTATTCACACTTTGGATAGATTTGAACTTAGCAAAATTGATGAATATGCTTATGATATCAAGATTTGGATAGCAGGTACACTTTCTCATCAACGAACATGTTTAGATGGGTTTGAAAACACAACAACAGAAGCAGGACAAACAATGGCTAAGGTTCTTAATGCATCACTAGAGCTAAGTAACAATGCTATGGATATAGTTAATGGTGTTGCAGGATTTGTTAAGGGTCTTAATTTGAGTTCTCTTACAAGTGCTATGAGTAGGAAGCTTTTGTCTGAGGATGGCATTCCTTCATGGGTTGGTCAAAGTCAAAGGAGGCTTCTAGAAGCTCCTCATGATGTTACGCCTAATGTAATAGTCGCTCAAGATGGTAGTGGACAATTTAAAACACTAAATGAGGCACTTGAACTTGTTCCTAAAAAGAACAAAATTCCTTTTGTTATTTATGTTAAGGCTGGTGTCTACAATGAGTATGTTGCTTTGGATAAACACAAGAGCCATGTTCATATTATTGGTGATGGTCCCACAAAGACCATATTCACTGGTAACAAAAACTACGTTGATGGTGTCCAGACTTACAACACCGCAACATTCAGTATCAACGCTGCCGATTTCATGGCCATCAACGTCGGATTCGAGAACTCAGCAGGAGCCGAGAAGCATCAAGCAGTAGCACTCCGTGTTACAGCAGACAAAGCAGTGTTCTACAACTGTCAAATGGATGGTTTCCAAGACACATTGTACACACAATCAAAAAGACAATTCTACCGTGACTGCACTGTGTCTGGAACCATTGATTTCATCTTTGGTGATGCAGCTGGAGTTTTCCAAAACTGCAAACTGATAGTGAAGAAGCCAATGGAAAACCAACAATGCATGGTGACAGCTGGTGGAAGGACGAAAGTAGACAGTCCAACTGCCCTAGTTTTCCAGAACTGCCACTTCACAGGAGAACCTGATGTTGTTGCCTTGAAGCCCAAGATATCATATTTGGGTAGACCATGGAGAGAATACTCCAAGGTAGTTATCATGGACTCAGTTATAGATGATATATTTCTACCAGAAGGTTACATGGCATGGATGGGAAGTGCTAACAAAGAGACATGCACTTACTATGAATACAATAACAAAGGACTAGGTGCTAACACTGAACATAGAGTTAAATGGCCAAATGTTAAAACCATTGCTGCAAATGAAGCTGTTAATTATTATCCAGAAAAGTTTTTTGAACTTGTTAACTCAACTCAACGTGATGCTTGGATTGTTCAATCTGGAGTACCTTATTCAATAGGCCCAATTGCCTCTGCTTAA 1731 0.4003 MAEFDNSQHEKKKKYAVVGLSSILLVAMVAAVAVGVSTTDEISGESGGDNQLATSQKNVKVICDSAEYKQTCEKSLANVSSETTDMKTLVIAAFNATAEELLSKIHNSTLYNELATDNMTKQAMDICKEVLGYAVDDIHQSIHTLDRFELSKIDEYAYDIKIWIAGTLSHQRTCLDGFENTTTEAGQTMAKVLNASLELSNNAMDIVNGVAGFVKGLNLSSLTSAMSRKLLSEDGIPSWVGQSQRRLLEAPHDVTPNVIVAQDGSGQFKTLNEALELVPKKNKIPFVIYVKAGVYNEYVALDKHKSHVHIIGDGPTKTIFTGNKNYVDGVQTYNTATFSINAADFMAINVGFENSAGAEKHQAVALRVTADKAVFYNCQMDGFQDTLYTQSKRQFYRDCTVSGTIDFIFGDAAGVFQNCKLIVKKPMENQQCMVTAGGRTKVDSPTALVFQNCHFTGEPDVVALKPKISYLGRPWREYSKVVIMDSVIDDIFLPEGYMAWMGSANKETCTYYEYNNKGLGANTEHRVKWPNVKTIAANEAVNYYPEKFFELVNSTQRDAWIVQSGVPYSIGPIASA 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00549 576 PANTHER PECTINESTERASE 8 573 - -
Car07g00549 576 CDD PMEI-like_3 62 212 - -
Car07g00549 576 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 210 IPR035513 -
Car07g00549 576 SUPERFAMILY Pectin lyase-like 255 569 IPR011050 -
Car07g00549 576 PANTHER PECTINESTERASE 8 573 - -
Car07g00549 576 SMART PMEI_2 54 206 IPR006501 GO:0004857
Car07g00549 576 TIGRFAM PME_inhib: pectinesterase inhibitor domain 52 209 IPR006501 GO:0004857
Car07g00549 576 Pfam Pectinesterase 257 549 IPR000070 GO:0030599|GO:0042545
Car07g00549 576 ProSitePatterns Pectinesterase signature 2. 401 410 IPR033131 -
Car07g00549 576 Pfam Plant invertase/pectin methylesterase inhibitor 59 206 IPR006501 GO:0004857
Car07g00549 576 ProSitePatterns Pectinesterase signature 1. 282 301 IPR018040 -
Car07g00549 576 Gene3D - 254 573 IPR012334 -
Car07g00549 576 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 208 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00549 Car-Chr7 4823710 4825957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00549 6 574 Carbohydrate Esterase AT3G05610 45.899 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00549 K01051 - gmx:100800194 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00549 07 4823710 4825957 Car07g00549 07 4823710 4825957 ECH
Car07g00549 07 4823710 4825957 Car01g00991 01 9361586 9363772 PCT