Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00545 ATGAATTCCAATTATGGCAAATCCAACCCTCAAAAACCATCCTCCGTTTCCCTCAACAACTTCAATTTCGATCTTGATCTCGGGATCGGATCCAATCGATCCAAATCCCTAAAAGATCAGAAAACCCCCAATCCCCCATCCTATTCTAATTCTTCTTCGTATTCATCGGCTCAACCCAAGAAAACCACATGGACCCATCAACCCGTTCAAACTCCGGCCGGGTTACCCGGTGCACCTCCGTCTATGGTTGGTGACATCTTCGGTAAGAGTTGGGGATCAACTCAACCTTCGGGCCCCAGCATTGGAATTGTTAATAAAAACCCTAACCTTTTTGGGGATTTGGTAACCTCTGCTTTGGGGCAAGGTTCTTCTTCTTCTAATAATAATAATGTCCCTTTGAAAAATGCAACTCCAACACCTAAAACTTCTTCCTTTTCAATGTCAAACATGGCTAATTCTTTGCCTAAAAATGTTAACACTCCACAAAGTGGTTCTACTTGGGGATCATCTTCTGGGAGTTTTAATTTGAATGCTAATAAAAGTCCCAATCTTGGAGGTCCTTCCATTGGAAGTGGCGGCGGTGTTGGTGTTGGTGTTGGAATTGGTTCTAATAATAAAGATCCGTTTAGTTCATTAGCTGGTTTTGGATCAAAGCAATCTTCTAGTATTAATTCAGCTGCTAAACCTCAAAAGATTGATTCAGAAGATGACGGTTTTGGAGATTTTCAGAATGCTTCAAAACCAAGCAAACCAAGCTCTACTTCATTTCCATCAAGTGGTAGTGTTGGAATTGATGTTGATTTTATCGGATCGTCGGCTTCAAATCAGACACCAGTTCAATCTTCAGGTGGTGGCGATCCAATGGACATGTTTTTCACATCTTCCTCTACTGCCTCATCTGGTGGTGGTGCTGCTGCTGCAGCCTCTTCTGAAATTGATGATTGGGGTACTGAGTTTGGAGGTGGAAACCATGATGTTGGTGGCACAACTACTGAACTTGATGGGTTGCCACCTCCTCCTGCCGGTGTATCAGGTTCTGCTGCCAAAGGCAAAGGAATGGATAATTACAAGCAAGGACAATTTGCTGATGCTATTAAGTGGCTTTCATGGGCTTTCATTCTTTTGGAGAAAGCTGGGGATGATGCTGGCACGGTGGAGGTTTTATCTTGCAGAGCTTCTTGTTATAAAGAAGTTGGAGAGTATAAAAAAGCTGTTGCGGATTGTACCAAGATTCTTGGAAACAATGAAAACAATGTATCTGTCCTCGTTCAGCGCGCTCTCTTGTACGAGAGTATGGAAAAGTACAGACTTGGTGCTGAAGATCTGAGAACTGTGCTGAAGATTGATCCTACTAATAGGGTTGCTAGAAGTACTGTTCACCGGTTGGCTAAAATGGCTGATTAG 1404 0.4295 MNSNYGKSNPQKPSSVSLNNFNFDLDLGIGSNRSKSLKDQKTPNPPSYSNSSSYSSAQPKKTTWTHQPVQTPAGLPGAPPSMVGDIFGKSWGSTQPSGPSIGIVNKNPNLFGDLVTSALGQGSSSSNNNNVPLKNATPTPKTSSFSMSNMANSLPKNVNTPQSGSTWGSSSGSFNLNANKSPNLGGPSIGSGGGVGVGVGIGSNNKDPFSSLAGFGSKQSSSINSAAKPQKIDSEDDGFGDFQNASKPSKPSSTSFPSSGSVGIDVDFIGSSASNQTPVQSSGGGDPMDMFFTSSSTASSGGGAAAAASSEIDDWGTEFGGGNHDVGGTTTELDGLPPPPAGVSGSAAKGKGMDNYKQGQFADAIKWLSWAFILLEKAGDDAGTVEVLSCRASCYKEVGEYKKAVADCTKILGNNENNVSVLVQRALLYESMEKYRLGAEDLRTVLKIDPTNRVARSTVHRLAKMAD 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00545 467 MobiDBLite consensus disorder prediction 88 104 - -
Car07g00545 467 MobiDBLite consensus disorder prediction 1 104 - -
Car07g00545 467 SUPERFAMILY TPR-like 347 457 IPR011990 GO:0005515
Car07g00545 467 MobiDBLite consensus disorder prediction 245 261 - -
Car07g00545 467 MobiDBLite consensus disorder prediction 212 289 - -
Car07g00545 467 PANTHER OS03G0340700 PROTEIN 1 467 - -
Car07g00545 467 Gene3D Tetratricopeptide repeat domain 345 466 IPR011990 GO:0005515
Car07g00545 467 MobiDBLite consensus disorder prediction 268 289 - -
Car07g00545 467 MobiDBLite consensus disorder prediction 1 70 - -
Car07g00545 467 MobiDBLite consensus disorder prediction 212 229 - -
Car07g00545 467 MobiDBLite consensus disorder prediction 121 174 - -
Car07g00545 467 SMART tpr_5 419 452 IPR019734 GO:0005515
Car07g00545 467 SMART tpr_5 385 418 IPR019734 GO:0005515
Car07g00545 467 SMART tpr_5 345 378 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00545 360 462 Calmodulin-binding Proteins AT3G25230 29.245 7.87e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00545 - - pvu:PHAVU_003G107800g 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00545 07 4803512 4806805 Car07g00545 07 4803512 4806805 ECH