Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00543 ATGGTTCATTTCCCATCTTTTGTCAACGGTTTGGCGAAAACCGTGTCTAACAAGAAAGAGAAGAATTTTCCAAAGGATGATGCAAGAAAGGCTATAGAAGAATTGGCAAAAGAAGCAAGGAAGAATGAATTATTGTTGAAATCTTCTGGGGTTGTTAAGTCCAACAAGGACAACGGTTTTGTTTCTGTGTTTACTAATAGGGGCCAAAAAGGAGTCAACCAGGATTGTCTTATGGTTTGGGAGGAATTTGGTGGGCAACAAGACATGATGTTTTGTGGAGTTTATGATGGGCATGGTGCTTGGGGACACTTTGTAGCCAAAAGGGTAAGGAAATTAGTACCAGCCTTTTTGCTATGCAATTGGAAGGAAAATGTAGCTGGTACATCAATTAACCTAGATTTTAAGATGGAAGCAGACAAAAATATACATGGATTGGACCTATGGAAACAATCCTACATAAAGACTTATGCTGCCGTTGACCAAGATCTTAAGCAGCACACTGGGTTTGATTCCTTTCGAAGTGGCACTACAGCTTTGACAATTATCAAACAGGGTGAAAACCTTATAATAGCAAATGTGGGTGATTCGAGAGTTGTCTTAGCAACAACTTCAGAGGATGGCACATTATTTCCACTTCAGCTTACCACTGATTTCAAACCAAATTTACCAAAGGAGGCAGAGCGCATAGAACAATCCAAAGGTCGAGTATTTTGCATGAAAGATGAACCAGGAGTATACAGAGTGTGGATGCCAAACGGTAAAACACCAGGATTAGCATTATCTAGAGCTTTTGGTGACTATTGTATGAAAGACTTTGGTTTAATCTCTGTGCCAGATGTGACACATACAAAGCTCACCACTAGGGACCAATTTATCATCCTAGCAACAGATGGGGTGTGGGATGTTGTATCGAACCAAGAGGCAGTGAAGATTGTTTCAACAACGCCACATAAAGAAAAAGCAGGTCAAAGACTTGTTAAATATGCTATGCGTGAATGGAAACGAAAGAAAAGTGGTATTGCCATGGATGATATGTCAGCAATTTGTCTCTTCTTTCACACTAAACTTGTTGTTGATTAA 1080 0.3972 MVHFPSFVNGLAKTVSNKKEKNFPKDDARKAIEELAKEARKNELLLKSSGVVKSNKDNGFVSVFTNRGQKGVNQDCLMVWEEFGGQQDMMFCGVYDGHGAWGHFVAKRVRKLVPAFLLCNWKENVAGTSINLDFKMEADKNIHGLDLWKQSYIKTYAAVDQDLKQHTGFDSFRSGTTALTIIKQGENLIIANVGDSRVVLATTSEDGTLFPLQLTTDFKPNLPKEAERIEQSKGRVFCMKDEPGVYRVWMPNGKTPGLALSRAFGDYCMKDFGLISVPDVTHTKLTTRDQFIILATDGVWDVVSNQEAVKIVSTTPHKEKAGQRLVKYAMREWKRKKSGIAMDDMSAICLFFHTKLVVD 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00543 359 Gene3D - 47 355 IPR036457 -
Car07g00543 359 Coils Coil 25 45 - -
Car07g00543 359 SMART PP2C_4 51 350 IPR001932 -
Car07g00543 359 SUPERFAMILY PP2C-like 58 353 IPR036457 -
Car07g00543 359 CDD PP2Cc 60 352 IPR001932 -
Car07g00543 359 PANTHER PROTEIN PHOSPHATASE 2C 41-RELATED 1 355 - -
Car07g00543 359 Pfam Protein phosphatase 2C 84 332 IPR001932 -
Car07g00543 359 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Car07g00543 359 PANTHER ALPHABET, ISOFORM E-RELATED 1 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00543 Car-Chr7 4794747 4797569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00543 1 353 PP2C-type Phosphatase Gene Family AT3G05640 58.592 1.54e-161 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00543 - - gmx:100814087 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00543 07 4794747 4797569 Car07g00543 07 4794747 4797569 ECH