Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00541 ATGGGACAAGAATCAGATTCAAAGGCCAAGTTGGTACTAGAAATTTGCTCCATTTCCACACGTTCTGCATCTTGTGTTCATAGGATTCTTTCAAACCCAACCAATACAACTTTCATTGATTGGTATTGCATTCTTGGAGTGGAAGAAAATGCAGGGGTTAATGCCATTCGCAAGAGATATCATAAACTTGCATTGCAACTTCACCCAGATAAGAACAAACATCCAAAAGCTGAAATTGCCTTCAAGCTTGTTTCTGAGGCAAATGCATGTTTAACAAATGCAGCAAAGAGAGAAGCTTTTGACTTTGAGAGGTACAAGCATTTCTGCATTGAGTGCAAAAGAATACCATATACATCAGGAAATGTTCCTGGAAATTCCGGCGGTTTGGGTTTCAAGGCATGGAATATTATCACAAGGTCGAGATCTTTTAAGCTATGGAGAAATATAAGGGATATGAGAGAGAGATTTAAGGAGGAGGCTAAGGTGATTGAGAATTGTTTGAGAGTAAATTCAATGTCAAGGACAGAATCTCCACTCTACAATCCAACTAGTTATCTAAATAGGAGCAAGTCACTGCATAGAATTGAGAAAGAAACGCCAGTTTTCAATCCATCAGATTACTTGTACCAAGGCTATCCTCATATGAGGGATCTTGTTAACAAGAATTCTTCCACATTTTGGTACTTGCAGACGACTAGTATGCTCCACAATCAAAAAGGAGGAGCCCAGCACAGCTCCCCTGTTTTTGAGGTCAAATCAAGGAGTATGTTTACAAGCCAATTTGCTTTTGTCTCGTCACGATATTAG 807 0.3928 MGQESDSKAKLVLEICSISTRSASCVHRILSNPTNTTFIDWYCILGVEENAGVNAIRKRYHKLALQLHPDKNKHPKAEIAFKLVSEANACLTNAAKREAFDFERYKHFCIECKRIPYTSGNVPGNSGGLGFKAWNIITRSRSFKLWRNIRDMRERFKEEAKVIENCLRVNSMSRTESPLYNPTSYLNRSKSLHRIEKETPVFNPSDYLYQGYPHMRDLVNKNSSTFWYLQTTSMLHNQKGGAQHSSPVFEVKSRSMFTSQFAFVSSRY 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00541 268 Pfam DnaJ domain 40 101 IPR001623 -
Car07g00541 268 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 255 - -
Car07g00541 268 ProSiteProfiles dnaJ domain profile. 40 104 IPR001623 -
Car07g00541 268 SMART dnaj_3 39 96 IPR001623 -
Car07g00541 268 Gene3D DnaJ domain 39 160 IPR036869 -
Car07g00541 268 PRINTS DnaJ domain signature 42 60 IPR001623 -
Car07g00541 268 PRINTS DnaJ domain signature 60 75 IPR001623 -
Car07g00541 268 PRINTS DnaJ domain signature 76 96 IPR001623 -
Car07g00541 268 CDD DnaJ 40 87 IPR001623 -
Car07g00541 268 SUPERFAMILY Chaperone J-domain 31 104 IPR036869 -
Car07g00541 268 PANTHER BNAC03G44070D PROTEIN 4 255 - -
Car07g00541 268 ProSitePatterns Nt-dnaJ domain signature. 81 100 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00541 Car-Chr7 4783602 4784873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00541 12 101 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.106 7.71e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00541 - - gmx:100801809 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00541 07 4783602 4784873 Car07g00541 07 4783602 4784873 ECH
Car07g00541 07 4783602 4784873 Car01g00982 01 9225775 9227011 PCT