Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00537 ATGGCTATGGCTTCTGCAGACATCAGAGACATTTTAACAACTTTCAATCCTTCCCTCGATTACTTCGCCATAACCACCGGTGACGGCCGCATTAAGATATGGGACACACTGAAGGGTCAAGTTCAAACCGAGTTCGCAGATATTTCTGCAACTCACGAAACTTCTATACTTGATAAATCAACTAAAGGTCATCTTTCAGTTGATTACACTTGCATCAAATGGTTATCGTTTGAAAGAAAGAGGAAAAGGAAACATTCTTCCTCTTTGTTGGTGCTTGGAACTGGTAGTGGTGATGTTTTAGCACTCGACGTTTCTGCCGGTGAATTGGCTTGGAAAATCAATGATTGTCATCCTGGAGGTGTCCGAGCTATTTCGTCTTTGGCAAATGGATCAAGCTTTTATACTGCAGGTGCTGATGGGATGATATGCATGATAGATTTCACGACAGGAAAAGTATTGGAAAAGTTTAAAGGTTCTTCAAAGGCAGTATCTTGTATATCAGTTTCTCCGGATGGGAAGAAGTTAGCTACTGCAGCAGCACAATTGAAGATTTTTAACTGTCCTAATCACAAAAAGATTCAAAAATGCTCCGGTCATCCTGGATCAGTCCGGTGTATGGTCTTCACTGAAGATGGCAAGTATATCCTCTCTTCTGCTGGTGGTGAAAGATATGTAGCTGTTTGGAGGATAGACGGCGCTAAAAAGCAGTCAGCTAGCTGTGTTCTTGCAATGGAGCAACCTGCTGTCTTTCTTGATAGCAGGTGCATTGATAAAGGACAGCATGATGATGCTGGCATATGTGTTTTGGCCGTATCAGAAGTTGGTCTTTGTTATTTATGGTTTGGAAATAGTATTGAAGAACTACGAAATGCAAAACCCACAAAAATATCATTATCTTTGGAAGACATGTCTACCAAAAATTATAAGGGTGCAGTTCCTGCAATATATGCTGCAAAGTTACAAAGCACCCAGAAGCCGGCTTCTGGGCAAGTTTTTCTTGTTTCTGGGATGCTTATAAAACCATCATTTCAAAATATTCAAGTGCATTCCGGTACAGATGTAAAGTTGAGTGTCTCCCGTGATGGTGTTCTTCTTCCAACAAGTCGATCTCTTGTCAAATCTAAGAAGAAGACAGATGTGCAGAGAATAACTGCACTAGACCGTGCCAATGCCGAGGATGCCTTGCTTCCAATTCCTAAACTTTTTGATTCTCACGAGAAAGAAGCATTTCAAGAATCTCTGGACAAGGAAGTAACAGATGATTTGCTTACAAGGGGTAAAGCTGATTCTATGGAGATAGATGATGCTATGGTCCAAAGTGAGACTGATGTAATTTGCATGGAGGACCGGATGAGATCGCTAGGATTGCTTTATAGTGAGAGTGATTGTGCATCACACTTTGAACTCTGTTCTACATTGTTAAAGGGTAAGGGTATTGAGCTGGAAGCTACTCTTCCGAAGAGAAAGGTAAAAGCAATTGTTTTGTCTATGGAACCAAGCGAAGCATTCAAGCTACTGGAAGTGTTGCTGGATACATGGCAATCAAGGTCGTCTAGCAGAGAGTATGTGCTTCCATGGATCCATAGCATATTAGTTAATCATGGTCATAATGTTGCTGAAGAGTCCATAACACGTATGCTTGATTCTGTATACCAGATTACAAATTCAAGAGGGGCAACTCTTCAGCCATTGTTACAATTATCTGGTCGTCTACAACTGGTGACATCACAGATTGACAAGGCTTCTCAGAAAATAAGCTATTCGCTGCATGATCTCCAAACagaagaaattgaagacgaggatgaattgtatcacgagaaagaagatgatgaagatgatgaagaagatgaTGCATCTGAAATAAGTACTGACGATGAAAACTAG 1884 0.3954 MAMASADIRDILTTFNPSLDYFAITTGDGRIKIWDTLKGQVQTEFADISATHETSILDKSTKGHLSVDYTCIKWLSFERKRKRKHSSSLLVLGTGSGDVLALDVSAGELAWKINDCHPGGVRAISSLANGSSFYTAGADGMICMIDFTTGKVLEKFKGSSKAVSCISVSPDGKKLATAAAQLKIFNCPNHKKIQKCSGHPGSVRCMVFTEDGKYILSSAGGERYVAVWRIDGAKKQSASCVLAMEQPAVFLDSRCIDKGQHDDAGICVLAVSEVGLCYLWFGNSIEELRNAKPTKISLSLEDMSTKNYKGAVPAIYAAKLQSTQKPASGQVFLVSGMLIKPSFQNIQVHSGTDVKLSVSRDGVLLPTSRSLVKSKKKTDVQRITALDRANAEDALLPIPKLFDSHEKEAFQESLDKEVTDDLLTRGKADSMEIDDAMVQSETDVICMEDRMRSLGLLYSESDCASHFELCSTLLKGKGIELEATLPKRKVKAIVLSMEPSEAFKLLEVLLDTWQSRSSSREYVLPWIHSILVNHGHNVAEESITRMLDSVYQITNSRGATLQPLLQLSGRLQLVTSQIDKASQKISYSLHDLQTEEIEDEDELYHEKEDDEDDEEDDASEISTDDEN 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00537 627 ProSiteProfiles Trp-Asp (WD) repeats profile. 196 238 IPR001680 GO:0005515
Car07g00537 627 MobiDBLite consensus disorder prediction 589 627 - -
Car07g00537 627 SMART WD40_4 189 229 IPR001680 GO:0005515
Car07g00537 627 SMART WD40_4 106 146 IPR001680 GO:0005515
Car07g00537 627 SMART WD40_4 1 35 IPR001680 GO:0005515
Car07g00537 627 SMART WD40_4 149 186 IPR001680 GO:0005515
Car07g00537 627 MobiDBLite consensus disorder prediction 594 627 - -
Car07g00537 627 PANTHER OS03G0300300 PROTEIN 3 626 - -
Car07g00537 627 PANTHER OS03G0300300 PROTEIN 3 626 - -
Car07g00537 627 Pfam WD domain, G-beta repeat 192 228 IPR001680 GO:0005515
Car07g00537 627 Gene3D - 144 281 IPR015943 GO:0005515
Car07g00537 627 Gene3D - 5 143 IPR015943 GO:0005515
Car07g00537 627 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 14 234 IPR011047 -
Car07g00537 627 Pfam Dip2/Utp12 Family 485 575 IPR007148 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00537 110 228 U-box Gene Family AT2G33340 30.081 1.36e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00537 K14546 - gmx:100784148 880.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00537 07 4736281 4742966 Car07g00537 07 4736281 4742966 ECH