Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00534 ATGCCTTTCAAGAGGTACGTTGAGATTGGAAGAGTTGCTCTTGTCAACTACGGAAAAGACTATGGTAAACTCGTTGTTATCGTTGATGTCATCGACCAAACCAGAGCTCTTGTTGATGCTCCGGATATGGAGAGGTCTCCTTTGAATTTCAAGAGGCTCTCACTCACTGACATCAAGATTGATATTAAGAGGGTCCCAAAGAAGAAGGATCTCATCAAAGCCATGGAGGCTGCTGATGTTAAGAACAAGTGGGAGAAGAGCTCATGGGGAAGAAAACTTATTGTGAGGAAGACTAGGGCATCCCTCAATGATTTTGATAGGTTCAAGATAATGTTGGCAAAGATCAAGAGGGCAGCCGTTGTTAGGCAAGAGCTTGCTAAGCTGAAGAAGACCGCATCTTAG 402 0.4403 MPFKRYVEIGRVALVNYGKDYGKLVVIVDVIDQTRALVDAPDMERSPLNFKRLSLTDIKIDIKRVPKKKDLIKAMEAADVKNKWEKSSWGRKLIVRKTRASLNDFDRFKIMLAKIKRAAVVRQELAKLKKTAS 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00534 133 Pfam Ribosomal protein L14 45 117 IPR002784 GO:0003735|GO:0005840|GO:0006412
Car07g00534 133 PANTHER RIBOSOMAL PROTEIN L14, PUTATIVE-RELATED 1 132 - -
Car07g00534 133 SUPERFAMILY Translation proteins SH3-like domain 5 93 IPR008991 -
Car07g00534 133 Gene3D - 92 127 - -
Car07g00534 133 PANTHER 60S RIBOSOMAL PROTEIN L14 1 132 IPR039660 GO:0003723|GO:0003735
Car07g00534 133 CDD KOW_RPL14 7 79 IPR041985 -
Car07g00534 133 Gene3D - 1 84 IPR014722 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00534 Car-Chr7 4725231 4726923 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00534 1 133 Cytoplasmic Ribosomal Protein Gene Family AT4G27090 84.211 5.09e-77 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00534 K02875 - gmx:100499889 236.884