Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00526 ATGGTGGTTGATCACAGTGGAAAGGGATCAGACGGTGAAGATTCATCAAACCCTAACGCCGTTTCATCGGATAACAGTCCAACTAGTACCGAACAGAAGAAAACCTGCGCCGATTGCGGTACTTCCAAAACTCCTCTATGGAGAGGCGGTCCTGCAGGACCAAAGTCGCTATGTAATGCTTGCGGGATCAGGAGCAGGAAGAAGAAGAGAGCTATTTTAGGGATAAGCAAAGGAAACAACGAAGATGGATCAAGAAAGGGAAAAAAGAGCAATGGAGGAGGAAGTAAAGTTGGTGATAATTTGAATTTGAAGCAGAAATTATTGAATTTAGGGAGAGAAGTGTTTATGCAGAGATCGCATTGGAAGAAATTGGGAGAAGAAGAACAAGCTGCGGTGCTTTTGATGTCTCTATCTTATGGATCCGTTTATGCCTAA 435 0.4345 MVVDHSGKGSDGEDSSNPNAVSSDNSPTSTEQKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKKRAILGISKGNNEDGSRKGKKSNGGGSKVGDNLNLKQKLLNLGREVFMQRSHWKKLGEEEQAAVLLMSLSYGSVYA 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00526 144 PANTHER OS01G0976800 PROTEIN 8 144 - -
Car07g00526 144 ProSiteProfiles GATA-type zinc finger domain profile. 30 66 IPR000679 GO:0006355|GO:0043565
Car07g00526 144 PANTHER OS01G0976800 PROTEIN 8 144 - -
Car07g00526 144 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 29 70 - -
Car07g00526 144 MobiDBLite consensus disorder prediction 12 39 - -
Car07g00526 144 Gene3D - 30 93 IPR013088 GO:0006355|GO:0008270
Car07g00526 144 MobiDBLite consensus disorder prediction 71 101 - -
Car07g00526 144 Pfam GATA zinc finger 36 70 IPR000679 GO:0006355|GO:0043565
Car07g00526 144 ProSitePatterns GATA-type zinc finger domain. 36 61 IPR000679 GO:0006355|GO:0043565
Car07g00526 144 MobiDBLite consensus disorder prediction 1 54 - -
Car07g00526 144 CDD ZnF_GATA 35 89 IPR000679 GO:0006355|GO:0043565
Car07g00526 144 SMART GATA_3 30 84 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00526 Car-Chr7 4654377 4655498 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00526 32 144 C2C2-Gata Transcription Factor Family AT3G06740 63.866 7.16e-43 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Car07g00526 GATA 1.4e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00526 - - aprc:113847917 233.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00526 07 4654377 4655498 Car07g00526 07 4654377 4655498 ECH
Car07g00526 07 4654377 4655498 Car03g02923 03 74492532 74502160 ECH