Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00525 ATGTGGCTTCGACCAAATGTCAGGACCGAGATTCGCCGTAACCGTTTCAAGGTCGCCGTCGACGCCGAAGACGGTCGCCGGAGACGAGAGGACGACATGATCGAGATTCGCAAGAGCAAGCGCAAAGAAAGGTTACAGAAGAAGCGTCGCGAAGGTTTTCAATATCACCAACAGTTCCCCACTCCTCTAACTTCTTCCAAGCTAGAGAATCTTGCTTCAATAGTTGCGGGTGTCTGGTCCAACGATGCTAGTGTGCAACTGGAAGCAACCACGAGGTTCCGGATTATACTTTCAATTGAACGAAACCCTCCGATTGAAGATGTTATGCAATCTGGTGTTGTGCCACGTTTTGTTGAGTTTCTTGTTAGGGAGGACTTCCCTCAACTTCAGTTTGAGGCTGCATGGTCTCTGACAAACATAGTATCTGGAACTTCTGAGAATACAAAGGTGGTGATTGATCACGGAGCAGTTCCTGTATTTGTCAACCTGCTTAGTTCATCTAGTGAAGATGTTCGAGAGCAGGCCGCGTGGGCTTTAGGAAATATTGCTGGTGACTCCCCTACGTGCCGTGATCTAGTGCTCAGCCATGGTGCCCTTGTCTCACTAGTGGCCCAGTTGAACAAGCAGGCCAGACTTTCAATGCTCAGAAATGGCACATGGACTTTATCAAACTTTTGCAGGGGCAAGCCACAGCCTGCATTTGAGATGGTAATATCTATTAATTTGGTTTGTTTGGATGATGAAGAAGTTTTGACAGATGCTTGCTGGGCCTTGTCATACCTTTCTGATGGCACAATTGACATAATTCAAGAAATTATTGAGGCAGGTGTATGTGGCCGACTGGTGCAGCTTCTTCGAAACCCATTTCCTTTGGCGCTGATCCCTGCTGTTCGTACATTGGGAAATATTGTGACCGGAGATGATATGCAGACTCAGTTAATGATCAATCACGGTGCACTTCCTTGCCTTTTGAACATATTGACACAAAATCATACAAAAAGCATAATGAAAGAAGCTTGTTGGACTATATCAAATATCACAGCTGGAACTAAGGAGCAAATACAGGCTGTTATTGAAGTTGGTCTTATTGCTCCGCTTGTCGACCTTCTTCAACATGCAGAGTTTGACATAAAAAAAGAAGCTGCTTGGGCAATATCAAATGCTACATCTGGTGGAACTCATGAGCAGATCAAGTACTTGGTGGGTCAGGGTTGCATAAAACCTATTTGTGATCTGCTTATTTGCCCCGATCCAAGAATCGTCGCTGTCTGTTTAGAGGGCCTAGAGAATATTCTGATTGTTGGAGAAACAGAGAAGGTCCTGGGTAACCGTGGAGATGCCAACTTGTATGCTCAGATGGTAGATGATTCTGGTGGATTGGAGAAGATTGAAAACCTGCAGAGTCACGACAACAATGAAATATATGAGAGGGCTGTTAAACTTCTTGAAGCGTACTGGTTGGAAGAGGAAGACGATATACTATCTTCAAGAGATGGTGATCCACCCGGTTTCAACTTTGGAAGCGAAGAGTTTCCACTCCCATCTGGTGGATTCAAATTCAGCGGCTGA 1569 0.4525 MWLRPNVRTEIRRNRFKVAVDAEDGRRRREDDMIEIRKSKRKERLQKKRREGFQYHQQFPTPLTSSKLENLASIVAGVWSNDASVQLEATTRFRIILSIERNPPIEDVMQSGVVPRFVEFLVREDFPQLQFEAAWSLTNIVSGTSENTKVVIDHGAVPVFVNLLSSSSEDVREQAAWALGNIAGDSPTCRDLVLSHGALVSLVAQLNKQARLSMLRNGTWTLSNFCRGKPQPAFEMVISINLVCLDDEEVLTDACWALSYLSDGTIDIIQEIIEAGVCGRLVQLLRNPFPLALIPAVRTLGNIVTGDDMQTQLMINHGALPCLLNILTQNHTKSIMKEACWTISNITAGTKEQIQAVIEVGLIAPLVDLLQHAEFDIKKEAAWAISNATSGGTHEQIKYLVGQGCIKPICDLLICPDPRIVAVCLEGLENILIVGETEKVLGNRGDANLYAQMVDDSGGLEKIENLQSHDNNEIYERAVKLLEAYWLEEEDDILSSRDGDPPGFNFGSEEFPLPSGGFKFSG 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00525 522 Pfam Armadillo/beta-catenin-like repeat 308 348 IPR000225 GO:0005515
Car07g00525 522 Pfam Armadillo/beta-catenin-like repeat 394 431 IPR000225 GO:0005515
Car07g00525 522 Pfam Armadillo/beta-catenin-like repeat 351 389 IPR000225 GO:0005515
Car07g00525 522 Pfam Armadillo/beta-catenin-like repeat 102 141 IPR000225 GO:0005515
Car07g00525 522 Pfam Armadillo/beta-catenin-like repeat 269 304 IPR000225 GO:0005515
Car07g00525 522 Pfam Armadillo/beta-catenin-like repeat 144 183 IPR000225 GO:0005515
Car07g00525 522 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 361 389 IPR000225 GO:0005515
Car07g00525 522 SMART arm_5 186 227 IPR000225 GO:0005515
Car07g00525 522 SMART arm_5 350 390 IPR000225 GO:0005515
Car07g00525 522 SMART arm_5 265 305 IPR000225 GO:0005515
Car07g00525 522 SMART arm_5 144 184 IPR000225 GO:0005515
Car07g00525 522 SMART arm_5 101 142 IPR000225 GO:0005515
Car07g00525 522 SMART arm_5 307 348 IPR000225 GO:0005515
Car07g00525 522 SMART arm_5 229 263 IPR000225 GO:0005515
Car07g00525 522 SMART arm_5 393 433 IPR000225 GO:0005515
Car07g00525 522 Pfam Atypical Arm repeat 448 492 IPR032413 -
Car07g00525 522 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 318 361 IPR000225 GO:0005515
Car07g00525 522 SUPERFAMILY ARM repeat 17 491 IPR016024 -
Car07g00525 522 PANTHER IMPORTIN ALPHA 3 512 - -
Car07g00525 522 PANTHER IMPORTIN SUBUNIT ALPHA 3 512 - -
Car07g00525 522 ProSiteProfiles IBB domain profile. 1 58 IPR002652 GO:0006606|GO:0061608
Car07g00525 522 Pfam Importin beta binding domain 12 91 IPR002652 GO:0006606|GO:0061608
Car07g00525 522 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 155 197 IPR000225 GO:0005515
Car07g00525 522 Gene3D - 11 50 IPR036975 GO:0006606
Car07g00525 522 Gene3D - 69 487 IPR011989 -
Car07g00525 522 PIRSF Importin_alpha 3 520 IPR024931 GO:0005737|GO:0006606|GO:0061608
Car07g00525 522 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 112 155 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00525 Car-Chr7 4642629 4648210 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00525 K15042 - gmx:100808498 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00525 07 4642629 4648210 Car07g00525 07 4642629 4648210 ECH
Car07g00525 07 4642629 4648210 Car01g00964 01 9027632 9031530 PCT