Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00521 ATGGCAAATAATTTAACGGGTCAACTAGTGGGATCAGAGATACATGGATTCCACACATTGCAAGAGCTGGACGTTAGGGGCATTATGGAGGAAGCAAGAATAAGATGGCTTCGTCCCAATGAGATTCACGCCATGCTTTGTAATCACAAGTATTTCACCGTCAATGTGAAACCAATGAATTTGCCCAAAAGCGGTACTATTGTATTATATGACCGCAAGATGCTTCGGAACTTCAGAAAAGATGGGCACAACTGGAAAAAGAAAAAGGACGGAAAAACTGTTAAAGAAGCTCATGAGCACTTAAAAGTTGGTAATGAAGAAAGGATTCATGTATATTATGCACATGGTCAAGATAACCCCAACTTTGTTCGTCGATGTTATTGGCTGCTTGATAAGAGTCTGGAACACATAGTCCTTGTTCATTACCGTGAAACGCAGGAGTCTCAAGGTTCTCCAATCACTCCCGTAAACTCAAACTCGACTACTGCCTCTGACCCGACTGCACCGTGGATATTGTCAGAAGAAATAGATTCAGGGACCACAACTGCATATGCTGGTGAGATTAACGACAATATAACAGTCAGAAGTCATGAACTGAAACTTCATGAGATTAATACACTTGAATGGGACGACCTAGTGGTTGCAAACGATCTTAACACCTCCACTGCGCCTAATGGAGGAAAAGTTCCATATTTTGGTCAACAAAATCAAATTTTACTGAATGGAAATTTTAGCAATGTATCCACCCATGCATCTACAGAAATACGTTCTTTCGATAATTCAACTCAGCCAATGGCAGCGAGCAATAGTGTTCCATACAGTTTTTCAGAAAGTGTTACTCTTCAGACAGTGGACAGTCAAGGAAATCGAAATGAGCAGAGGAACCACCCTGTCGCTTCAGGTGGTGTTGATTCATTGGACACTTTGTTCAATGGCAGATTGCAAAGTCAGGACAGCTTTGGAATGTGGGTGAACCAAATCATGTCTGATTCCCCTTGTTCAGTCGATGAGTTGGCTCTTAAATCCTCGGTTTCATCTATTAATGAACCGTATTCATCTTTAGTATTGGATAATCAGCAACTCTCTCTTCCTGAACAAGTGTTTAATCTCACAGATGTGTCCCCTGCGTGTGCTTCTTCCACAGAGAAATCACAGGTCCTGGTGACTGGATTCTTTCATGAAGACTACATGCACATCTCTAAAACCAATCTAATGTGTGTCTGTGGTGATGCAAGTGTTCCTGCAGAAATTGTTCATGATGGAGTCTACCGATGCTGGATACCACCACATTCTCCGGGACTCGTGAATCTCTACATGAGCTTTGATGGCCATAAGCCTATCAGCCAAGTTGTTAATTTTGAGTATCGTACTCCTATTTTGCACGATCCAATAGAATCTGTGGAAGAGAAAAACAATTGGGACGAGTTTCGACTTCAAATGAGGCTTGCTTATTTGCTCTTTGCTAAACAGCAGAGTCTCGATGTAATCGCTAGTAAAGTATCACCTAGTAGACTGAAGGAGGCAAGGGAATTCTCCTTGAAGACATCGTTTATTTCCAATAGTTGGCAATACTTAATGAAGTCAACAGAAGACAACCAAATTCCGTTTTCGCAAGCAAAAGATGCCCTGTTTGGAATTGCATTGAAAAACAGATTAAAGGAATGGCTTGCAGAAAGAATTGTTTTAGGATGTAAGACTACTGAATATGACGCGCAAGGCCAAAGTGTCATCCATTTGTGTGCAATTTTGGGATATACATGGGCAGTTACTTTATTTTCATGGTCAGGCTTGTCGCTAGATTTTCGGGATAAGTTTGGATGGACTGCTCTTCATTGGGCAGCATATTACGGCAGGGAGAAAATGGTTGCAACTTTATTGTCAGCTGGGGCAAAGCCTAACTTGGTCACAGATCCAACTCAACAAAATCCTGATGGATGTACTGCTGCTGATCTTGCTTATAATAGGGGTTATCATGGCTTATCAGCTTATCTTTCGGAAAAGTCTCTAGTTGAGCAGTTCAATGACATGAGCTTAGCTGGAAATATCAGTGGCTCACTGGAAACTAGTATGGATGATCCAGTAAATTCTGAGAACTTTACCGAGGAGCAGATCTACATGAAAGATACATTGGCAGCTTACAGGACAGCTGCTGATGCAGCAGCACGCATACAAACTGCATATAGGGAGCATTCGTTGAAGTTACAAACAGAGGCGGTTGAGTTTTCCAGCCCAGAAGCTGAAGCACGCAAAATAGTTGCAGCAATGAAGATTCAGCATGCCTTCCGAAATTTTGAGACAAAGAAAGTGATGGCTGCTGCTGCTCGCATACAGCATAGGTTCCGTGCATGGAAGATTCGTAGAGAGTTTGTCAATAAGCGCCTTCAAGCTATCAAGATTCAAGCTGCTTTCCGGTGCTTTCAACAAAGGAAGCAATATCGTAAAATTATTTGGTCAGTTGGTGTGGTTGAGAAAGCAGTGTTGCGTTGGCGTTTAAAGAGAAAGGGCTTCCGCGGACTCCAGATTAATACTGCAGAAGCAGCGGGAGATCAGAATCAGCACAGTGATGTAGAGGAGGAATTCTTTCGAACTGGTAGGAAACAAGCTGAAGAACGTGTTGAGAGAAGTGTAATACGAGTGCAGGCTATGTTCCGTTCGAAGAAAGCTCAAGAAGATTACAGGAGAATGAAGTTGGCTCTTAATCAAGCAAAGCTGGAACGTGAATATGAAAAAATGCTTAGTACTGAAGTTGAAATGGAACTGAAGACATAG 2769 0.4207 MANNLTGQLVGSEIHGFHTLQELDVRGIMEEARIRWLRPNEIHAMLCNHKYFTVNVKPMNLPKSGTIVLYDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGQDNPNFVRRCYWLLDKSLEHIVLVHYRETQESQGSPITPVNSNSTTASDPTAPWILSEEIDSGTTTAYAGEINDNITVRSHELKLHEINTLEWDDLVVANDLNTSTAPNGGKVPYFGQQNQILLNGNFSNVSTHASTEIRSFDNSTQPMAASNSVPYSFSESVTLQTVDSQGNRNEQRNHPVASGGVDSLDTLFNGRLQSQDSFGMWVNQIMSDSPCSVDELALKSSVSSINEPYSSLVLDNQQLSLPEQVFNLTDVSPACASSTEKSQVLVTGFFHEDYMHISKTNLMCVCGDASVPAEIVHDGVYRCWIPPHSPGLVNLYMSFDGHKPISQVVNFEYRTPILHDPIESVEEKNNWDEFRLQMRLAYLLFAKQQSLDVIASKVSPSRLKEAREFSLKTSFISNSWQYLMKSTEDNQIPFSQAKDALFGIALKNRLKEWLAERIVLGCKTTEYDAQGQSVIHLCAILGYTWAVTLFSWSGLSLDFRDKFGWTALHWAAYYGREKMVATLLSAGAKPNLVTDPTQQNPDGCTAADLAYNRGYHGLSAYLSEKSLVEQFNDMSLAGNISGSLETSMDDPVNSENFTEEQIYMKDTLAAYRTAADAAARIQTAYREHSLKLQTEAVEFSSPEAEARKIVAAMKIQHAFRNFETKKVMAAAARIQHRFRAWKIRREFVNKRLQAIKIQAAFRCFQQRKQYRKIIWSVGVVEKAVLRWRLKRKGFRGLQINTAEAAGDQNQHSDVEEEFFRTGRKQAEERVERSVIRVQAMFRSKKAQEDYRRMKLALNQAKLEREYEKMLSTEVEMELKT 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00521 922 SUPERFAMILY E set domains 369 456 IPR014756 -
Car07g00521 922 ProSiteProfiles IQ motif profile. 873 901 IPR000048 GO:0005515
Car07g00521 922 Pfam CG-1 domain 31 144 IPR005559 GO:0003677
Car07g00521 922 SUPERFAMILY Ankyrin repeat 546 667 IPR036770 -
Car07g00521 922 SMART CG_1_2 28 146 IPR005559 GO:0003677
Car07g00521 922 Gene3D - 532 674 IPR036770 -
Car07g00521 922 SMART iq_5 768 790 IPR000048 GO:0005515
Car07g00521 922 SMART iq_5 791 813 IPR000048 GO:0005515
Car07g00521 922 SMART iq_5 871 893 IPR000048 GO:0005515
Car07g00521 922 ProSiteProfiles IQ motif profile. 792 816 IPR000048 GO:0005515
Car07g00521 922 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 15 922 - -
Car07g00521 922 Gene3D - 766 816 - -
Car07g00521 922 Gene3D Immunoglobulins 364 459 IPR013783 -
Car07g00521 922 ProSiteProfiles CG-1 DNA-binding domain profile. 25 151 IPR005559 GO:0003677
Car07g00521 922 Pfam Ankyrin repeats (3 copies) 558 634 IPR002110 GO:0005515
Car07g00521 922 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 15 922 - -
Car07g00521 922 ProSiteProfiles Ankyrin repeat region circular profile. 605 633 - -
Car07g00521 922 Pfam IQ calmodulin-binding motif 796 813 IPR000048 GO:0005515
Car07g00521 922 Coils Coil 885 905 - -
Car07g00521 922 ProSiteProfiles Ankyrin repeat profile. 605 637 IPR002110 GO:0005515
Car07g00521 922 ProSiteProfiles IQ motif profile. 770 798 IPR000048 GO:0005515
Car07g00521 922 SMART ANK_2a 605 634 IPR002110 GO:0005515
Car07g00521 922 SMART ANK_2a 644 675 IPR002110 GO:0005515
Car07g00521 922 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 711 819 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00521 Car-Chr7 4607495 4616572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00521 28 905 CAMTA Transcription Factor Family AT3G16940 53.636 0.0 940
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Car07g00521 CG-1 2e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00521 K21596 - gmx:100793970 1524.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00521 07 4607495 4616572 Car07g00521 07 4607495 4616572 ECH
Car07g00521 07 4607495 4616572 Car01g00953 01 8894046 8906315 PCT