Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00519 atgcaatcctctctctctctctccctctctcCCGCCATCGTATCCAGATCACATCCCTCTTTTACAGTCTCCTCTGTCAAGCCTCTCAACCTCAGCTTTTGCGGTTTAAGACGCGAAGCGTTGGGATTAGGTTTTGCAACTTCTCTTAACCGTAATCTCCGCCAGCTTCCTCGCCGCCAACACTCCGCGGTAGTAACCGCTGCGGCATCTGACAATGGCAGCACTTCTGGATCCTTTGATTATGATTTGTTGATTATtggtgctggtgttggtggtcatggtgctgCGCTTCACGCTGTCGAGAAGGGACTGAAAACAGCTATAGTGGAGGGAGACGTGGTGGGAGGGACATGTGTAAACAGAGGATGTGTTCCTTCTAAAGCTCTTTTGGCTGCTAGTGGTCGTATGCGGGAACTAAAGAGTGATCATCATTTGAAGTCTTTGGGTATACATGTTTCTGCTGCTGAGTATGACAGACAAGGAGTAGCTGATCATGCTAACAATCTTGCTTCAAAAATCCGTAGTAATTTGACCAACTCTCTAAAAGCGATTGGAGTAGACATACTTACTGGTTTTGGTACTATAGTGGGTCCTCAAAAGGTGAAAATTGGCTCTTCAAACAGCATAGTAACTGCAAAAGATATCATCATTGCCACTGGTTCTGTTCCTTTTGTTCCTAAGGGTGTTGAAGTTGATGGGAAGACTGTGATTACCAGTGACCATGCACTCAAACTGGAGTCTGTTCCTGATTGGATAGCAATTGTAGGAAGTGGGTATATTGGCCTTGAATTCAGTGATGTATATACGGCACTTGGAAGTGAGGTTACTTTTGTTGAAGCTTTAGATCAGCTTATGCCTGGATTTGATCCTGAAATCAGCAAGCTGGCTCAGAGGGTTCTTGTAAATCCCCGTAATATTGACTACCATACTGGAGTTTTTGCATCCAAGATCACTCCTGCAAGGGATGGAAAACCTGTCTTGATTGAACTTATTGATGCAAAAACCAAGGAACCAAAGGACACTTTGGAGGTGGATGCTGCACTAATAGCAACTGGAAGGGCTCCATTCACACAAGGCCTAGGACTGGAGAATGTTGATGTAGCAACACAGCGAGGTTTTGTTCCTGTGGACGAGCGCATGCGTGTAATTGATGCAAATGGCAAGCTGGTACCTCATTTATTCTGTATTGGCGATGCAAATGGAAAGATGATGCTTGCTCATGCTGCCAGTGCTCAAGGAATTTCAGTGGTTGAACAAGTCACTGGAAGAGATCACGTGCTCAATCATTTAAGTATCCCAGCTGCATGTTTCACTCATCCTGAAATTAGCATGGTTGGATTGACAGAGCCTCAAGCAAGGGAGAAAGGTGAAAAGGAGGGGTTTGAAGTCAGTGTTGCTAAAACAAGTTTTAAAGCTAACACGAAAGCTCTAGCAGAAAATGAAGGGGAGGGACTTGCCAAGTTGATATACAGACCTGACAATGGAGAAATCCTAGGAGTTCATATTTTCGGTTTGCACGCAGCAGATCTCATCCATGAAGCATCCAATGCTATAGCATTAGGGACACGTATTCAAGACATAAAACTTGCAGTTCATGCACATCCAACTCTGTCTGAGGTTCTTGATGAGCTATTTAAATCAGCAAAGGTTAAAGCACACGCATCAATCCCAGTAAGTGAACCAGTTGCAGTCTAA 1695 0.426 MQSSLSLSLSPAIVSRSHPSFTVSSVKPLNLSFCGLRREALGLGFATSLNRNLRQLPRRQHSAVVTAAASDNGSTSGSFDYDLLIIGAGVGGHGAALHAVEKGLKTAIVEGDVVGGTCVNRGCVPSKALLAASGRMRELKSDHHLKSLGIHVSAAEYDRQGVADHANNLASKIRSNLTNSLKAIGVDILTGFGTIVGPQKVKIGSSNSIVTAKDIIIATGSVPFVPKGVEVDGKTVITSDHALKLESVPDWIAIVGSGYIGLEFSDVYTALGSEVTFVEALDQLMPGFDPEISKLAQRVLVNPRNIDYHTGVFASKITPARDGKPVLIELIDAKTKEPKDTLEVDAALIATGRAPFTQGLGLENVDVATQRGFVPVDERMRVIDANGKLVPHLFCIGDANGKMMLAHAASAQGISVVEQVTGRDHVLNHLSIPAACFTHPEISMVGLTEPQAREKGEKEGFEVSVAKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKLAVHAHPTLSEVLDELFKSAKVKAHASIPVSEPVAV 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00519 564 PRINTS FAD-dependent pyridine nucleotide reductase signature 83 102 - -
Car07g00519 564 PRINTS FAD-dependent pyridine nucleotide reductase signature 212 230 - -
Car07g00519 564 PRINTS FAD-dependent pyridine nucleotide reductase signature 251 269 - -
Car07g00519 564 PRINTS FAD-dependent pyridine nucleotide reductase signature 344 360 - -
Car07g00519 564 PRINTS FAD-dependent pyridine nucleotide reductase signature 378 400 - -
Car07g00519 564 Pfam Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 432 543 IPR004099 GO:0045454
Car07g00519 564 PIRSF Hg-II_reductase_MerA 45 546 IPR001100 GO:0016491
Car07g00519 564 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-I active site. 115 125 IPR012999 GO:0016668
Car07g00519 564 PRINTS Pyridine nucleotide disulphide reductase class-I signature 82 104 - -
Car07g00519 564 PRINTS Pyridine nucleotide disulphide reductase class-I signature 114 129 - -
Car07g00519 564 PRINTS Pyridine nucleotide disulphide reductase class-I signature 215 224 - -
Car07g00519 564 PRINTS Pyridine nucleotide disulphide reductase class-I signature 251 276 - -
Car07g00519 564 PRINTS Pyridine nucleotide disulphide reductase class-I signature 345 359 - -
Car07g00519 564 PRINTS Pyridine nucleotide disulphide reductase class-I signature 393 400 - -
Car07g00519 564 PRINTS Pyridine nucleotide disulphide reductase class-I signature 428 449 - -
Car07g00519 564 PRINTS Pyridine nucleotide disulphide reductase class-I signature 497 512 - -
Car07g00519 564 PRINTS Pyridine nucleotide disulphide reductase class-I signature 519 539 - -
Car07g00519 564 Gene3D - 224 351 IPR036188 -
Car07g00519 564 SUPERFAMILY FAD/NAD(P)-binding domain 72 422 IPR036188 -
Car07g00519 564 Gene3D - 431 555 IPR016156 GO:0016491|GO:0050660
Car07g00519 564 Gene3D - 81 414 IPR036188 -
Car07g00519 564 PANTHER DIHYDROLIPOAMIDE DEHYDROGENASE 20 556 - -
Car07g00519 564 TIGRFAM lipoamide_DH: dihydrolipoyl dehydrogenase 81 551 IPR006258 GO:0004148|GO:0050660
Car07g00519 564 SUPERFAMILY FAD/NAD-linked reductases, dimerisation (C-terminal) domain 431 546 IPR016156 GO:0016491|GO:0050660
Car07g00519 564 Pfam Pyridine nucleotide-disulphide oxidoreductase 81 413 IPR023753 GO:0016491
Car07g00519 564 PANTHER DISULFIDE OXIDOREDUCTASE 20 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00519 Car-Chr7 4576474 4583225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00519 1 555 Acyl Lipid Metabolism Gene Families AT3G16950 81.640 0.0 907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00519 K00382 - gmx:100809578 962.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00519 07 4576474 4583225 Car07g00519 07 4576474 4583225 ECH
Car07g00519 07 4576474 4583225 Car01g00950 01 8875139 8884147 PCT