Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00505 ATGATGGGAAGTGAAGAAAGAGATAAAGTTGTGGAGAAGAAGATCCAAGAACTAGAAGAAGGTCATGCTTACATGAAACAACAAATGTCAAACCTTAAACTTTCTGATGCCAGAGAAAatcatcaacatcatcatcatcgtcaAAGGTCTCACTCTGTTTCTCCACAACGTTCAAGATTGGGTTCGTGGAACAAAAATTCTTGTTCATTCAAACACTCATCACCACTTCAAAGGGAAACTCGTGCTCATTCACAATCACTCATCAATTTCACTGAAAAACAGTATCTCAATATTTTGCAATCTATTGGACATTCTGTTCATATATTGGATCTTAACTCTCGTATCAtttactgGAACCGTAGTGCTGAAAATCTATATGGTTATGCAGAAGATGAAGTTTTGGGGAAGGACGGGATTGAGTTGATTGTGGATTCTAGGGATTGGGGGTTAGCTTGTGATACAGTGAACTCTGTTATGAAGGGAGAGAGATGGAGTGGGCAATTCCTTGTCAAGAACAAGAAGGGGGAAAGGTTTTTAGCTGTAACAACCAATACTCCTTTTTATGATCATGATGATCGTAGCTTAGTTGGGATTATTTGTGTTTCGAGTGATTCGCGGCCTTTTCTTGAAATGAGAGTTCAATTTCATGGTGTAAAGAATGCTGAATTGGATTATGGTTCGGCTCATCCTAAAAGTAGCATTACGAATAAACTTGGCTTTGATTCTCAGCAGCCACTTCAAGCTGGTCTAACATCTAAAATTTCAAATTTGGCGTCGAAGATGGGTAACAAAGTTAAGTCGAAAATCTGGACAGGAGAAAATAATGGAGAAAGTCATCATTCTGAACATGGTTTCTCAGAATCTGTTGTTTCGGAACATAGAGAAGATGCTAATTCGAGCGGAGCTAGCACACCTAGAGGCGATTTGCAACAGTCCCCTTTTGGTGGTGTGTTTTTTCATGTTGAAGAAAAGTCACTAGGAAAAACTTTGAGAGACTCTGCTGATGAGGGTGAAGGAAAACCTGTTCATAAAATTTTACCTACCAATAAAGCTGAAGCCTGGATTCAAAAGAAAACGTCATCGTGGCCGTGGAAAACAAATGATCGAGAAGCAAGGAACGGTCATGATGCTAGACCGTGGAGGCAGAATGATCAAGAAAATGAATCAGTTAATCAGAAGGTTGTTTCTTCTGGATTGAAGCAGGAAAGCCACGCAGGAGAAAGTAATCGTCCTACTTATAATGAGGCTTCGAAGTCGTGGTCTTCGCCGTTTAATGTTAACAGCACAAGCAGTGCTAGCAGCTGTGGAAGTGCTGGTAGTTGTGTTGTTAATAATAAAGCAGATTTAGACACTGATTGCTTGGATTCTGAAATTTTGTGGGAGGATTTGACGATTAGAGAACAAATTGGACAAGGTTGTTGTGGAACTGTATATCATGCTCTGTGGTATGGATCAGATGTTGCTGTCAAGGTTTTCTCAAAGCAAGAGTATTCAGATGATGTGATACTGTCATTCAGACAAGAGGTATCTGTCATGAAAAGACTTCGGCACCCAAATATTCTTCTCTTTATGGGAGCAGTCACTTCACCTCAACGTCTCTGCATTGTCACAGAGTTTCTCCCACGAGGGAGTTTGTGTCGCTTGTTACACAGAAACACACCCAAATTTGACATGAGACGGCGAGTTCATATGGCCTTGGATATTGCACGAGGCATAAATTATCTTCATCATTGTAACCCGCCTATCATCCATAGAGATTTGAAGTCTTCAAATCTTCTAGTTGATAAGAATTGGACTGTGAAGGTTGGTGATTTTGGTCTATCACGTCTTAAGCATGAAACATATCTCACAACCAAGACAGGAAGGGGAACGCCCCAATGGATGGCACCAGAAGTTCTTCGTAACGAACCGTCAGATGAGAAGTCTGATGTTTACAGCTTTGGGGTGATATTATGGGAACTTGCAACTGAAAAGATTCCTTGGGATAATCTCAACTCAATGCAGGAATCTTGCAGGTGA 2019 0.4002 MMGSEERDKVVEKKIQELEEGHAYMKQQMSNLKLSDARENHQHHHHRQRSHSVSPQRSRLGSWNKNSCSFKHSSPLQRETRAHSQSLINFTEKQYLNILQSIGHSVHILDLNSRIIYWNRSAENLYGYAEDEVLGKDGIELIVDSRDWGLACDTVNSVMKGERWSGQFLVKNKKGERFLAVTTNTPFYDHDDRSLVGIICVSSDSRPFLEMRVQFHGVKNAELDYGSAHPKSSITNKLGFDSQQPLQAGLTSKISNLASKMGNKVKSKIWTGENNGESHHSEHGFSESVVSEHREDANSSGASTPRGDLQQSPFGGVFFHVEEKSLGKTLRDSADEGEGKPVHKILPTNKAEAWIQKKTSSWPWKTNDREARNGHDARPWRQNDQENESVNQKVVSSGLKQESHAGESNRPTYNEASKSWSSPFNVNSTSSASSCGSAGSCVVNNKADLDTDCLDSEILWEDLTIREQIGQGCCGTVYHALWYGSDVAVKVFSKQEYSDDVILSFRQEVSVMKRLRHPNILLFMGAVTSPQRLCIVTEFLPRGSLCRLLHRNTPKFDMRRRVHMALDIARGINYLHHCNPPIIHRDLKSSNLLVDKNWTVKVGDFGLSRLKHETYLTTKTGRGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQESCR 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00505 672 MobiDBLite consensus disorder prediction 36 62 - -
Car07g00505 672 MobiDBLite consensus disorder prediction 384 421 - -
Car07g00505 672 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 32 668 - -
Car07g00505 672 MobiDBLite consensus disorder prediction 273 294 - -
Car07g00505 672 ProSiteProfiles PAS repeat profile. 91 162 IPR000014 -
Car07g00505 672 Pfam Protein tyrosine and serine/threonine kinase 463 665 IPR001245 GO:0004672|GO:0006468
Car07g00505 672 SMART serkin_6 463 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00505 672 Gene3D Transferase(Phosphotransferase) domain 1 541 672 - -
Car07g00505 672 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 32 668 - -
Car07g00505 672 MobiDBLite consensus disorder prediction 295 310 - -
Car07g00505 672 MobiDBLite consensus disorder prediction 329 345 - -
Car07g00505 672 CDD PAS 106 204 IPR000014 -
Car07g00505 672 CDD STKc_MAP3K-like 469 668 - -
Car07g00505 672 TIGRFAM sensory_box: PAS domain S-box protein 92 197 IPR000014 -
Car07g00505 672 MobiDBLite consensus disorder prediction 329 421 - -
Car07g00505 672 SUPERFAMILY PYP-like sensor domain (PAS domain) 91 204 IPR035965 -
Car07g00505 672 Gene3D Phosphorylase Kinase; domain 1 456 540 - -
Car07g00505 672 Pfam PAS fold 94 201 IPR013767 GO:0006355
Car07g00505 672 Gene3D PAS domain 104 207 - -
Car07g00505 672 SMART pas_2 93 160 IPR000014 -
Car07g00505 672 MobiDBLite consensus disorder prediction 270 313 - -
Car07g00505 672 SUPERFAMILY Protein kinase-like (PK-like) 453 668 IPR011009 -
Car07g00505 672 MobiDBLite consensus disorder prediction 363 383 - -
Car07g00505 672 ProSiteProfiles Protein kinase domain profile. 463 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00505 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 582 594 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00505 Car-Chr7 4455880 4462252 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00505 13 668 MAP Kinase Kinase Kinase AT3G06620 57.347 0.0 751
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Car07g00505 PK_Tyr_Ser-Thr 3.2e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00505 - - gmx:100800867 979.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00505 07 4455880 4462252 Car07g00505 07 4455880 4462252 ECH
Car07g00505 07 4455880 4462252 Car01g00928 01 8583122 8589445 PCT