Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00494 ATGGGAAATTCATCAACATTAACCGATGATGAAATTCAGAAGAAGCAAAACAAAGGAAATTGCATAATCAATTTCCCTTTCTCACCTGCTTTACCATCATGCAGCATCTTTGATATCATTCCACCACAATCTGATGATCATCAAAAATCTTCTTCTTCTTCCTTTGCTGGTTACATCGACTTGTTAAGCACAAATGATTTCACCGTTACTTCTTCTTCTACTTTACTCGATTGGTTCCCAAACACTGTCTTTGATGCCGACGACACGTCACCACCGCCTGCTCAAATTAACCAGCTTCCGTTACCGTCTCCCGCCGTCTCTGACGTGTTCAACACTAATCCGGCCACTCCTATCTCCGTTTCCTCTTCGATTTCTTCATCCTCCAATGAAGTTTGTGTTGCGAACAAACCAATTGTTCCGGTAGCAGgaaatgaacatgaacttgaattactcgaagaagaagcgaaggataaagatgaagatCGTGCAATCACACATGTAGAGAATCAAAATCAAGACCGAACGATTCAGACAAAAAAACTAGTGAAGGgaaggaagaagaagaagaagagcaggaaagaaagagcaacaagaGTTTCGTTCAAGACAAAGAGTGATGTTGATCACTTGGATGATGGTTATAGGTGGCGTAAGTATGGTCAAAAACCTGTCAAAAACAGCCCTTATCCCAGGAGCTATTATCGTTGCACCACAGCAGGTTGTGGGGTGAAGAAGCGTCTGGAGCGTTCCGCCATGGAGCCTTCCTTTGTGCTAACAAGCTATGAAGGCCAACACACTCACTTCTCTCCAATTTTGACGCGTGCAGCTGAACTTGGCTTTGTCACTAATGCTTCAAGTTTCCATGACAAAAACTACCAACACCGCAACACACTTGCTACTCAATCACAACCACAACACTTTCAACACTTTCACCACCAACCGGACTCGTCTTCTTCCTTATTCAATAACTCTTACAACATTGCTCCACCTTTCAATGTTGTTAATTCTGCTCATAATTTTATCAACCAAGAGAATTGTGCTGGAAGTTCTTCTCACTCGTCTTGTTTGAGAATTAATCTCCGTGATTTGGTGAGTGACGATGGGCTCCTTCAAGACATGATTGCGCCAAAggagatagctggagctggagctgcagatggagaaggaAGAATTGATGGTGATGTTACCTTCATGTTGGGCTAA 1203 0.3791 MGNSSTLTDDEIQKKQNKGNCIINFPFSPALPSCSIFDIIPPQSDDHQKSSSSSFAGYIDLLSTNDFTVTSSSTLLDWFPNTVFDADDTSPPPAQINQLPLPSPAVSDVFNTNPATPISVSSSISSSSNEVCVANKPIVPVAGNEHELELLEEEAKDKDEDRAITHVENQNQDRTIQTKKLVKGRKKKKKSRKERATRVSFKTKSDVDHLDDGYRWRKYGQKPVKNSPYPRSYYRCTTAGCGVKKRLERSAMEPSFVLTSYEGQHTHFSPILTRAAELGFVTNASSFHDKNYQHRNTLATQSQPQHFQHFHHQPDSSSSLFNNSYNIAPPFNVVNSAHNFINQENCAGSSSHSSCLRINLRDLVSDDGLLQDMIAPKEIAGAGAADGEGRIDGDVTFMLG 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00494 400 SUPERFAMILY WRKY DNA-binding domain 203 269 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car07g00494 400 MobiDBLite consensus disorder prediction 180 197 - -
Car07g00494 400 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 56 375 - -
Car07g00494 400 MobiDBLite consensus disorder prediction 180 202 - -
Car07g00494 400 Pfam WRKY DNA -binding domain 211 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car07g00494 400 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 56 375 IPR044810 GO:0003700
Car07g00494 400 SMART WRKY_cls 210 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car07g00494 400 ProSiteProfiles WRKY domain profile. 205 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car07g00494 400 Gene3D WRKY domain 197 263 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car07g00494 400 Coils Coil 141 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00494 Car-Chr7 4366352 4368082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00494 178 279 WRKY Transcription Factor Family AT2G47260 64.706 1.59e-40 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car07g00494 WRKY 4.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00494 - - mtr:MTR_4g122530 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00494 07 4366352 4368082 Car07g00494 07 4366352 4368082 ECH
Car01g00921 01 8491545 8494292 Car07g00494 07 4366352 4368082 PCT