Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00475 ATGAATGTTTTTCTGTTTGTCCTCCAGTTCCTATCTTTCATTCTATTAACTACTCCTACTAAAGCATCTGAAATAAATGTTGAAAGCTATGAATCTGATAGGATAACTAATCTTCCAGGACAACCTTCAACTCCATCAGTTTCACATTTTTCAGGTTACATCACTGTCAATCAAGAACATGGCAGAGCCCTTTTCTATTGGTTCTTTGAAGCTCAATCTGAGCCCTCCAATAAGCCTCTCCTGCTCTGGCTCAATGGAGGACCTGGATGCTCTTCTATTGGATATGGTGCTGTTGTTGAGATAGGACCTCTTTTAGTCAACAAAAATGGTGAAGGACTCAACTTCAACTCATACTCTTGGAATCAAGAAGCAAATTTGTTATTTGTGGAGTCACCTGTTGGAGTTGGTTTTTCTTACACCAACACTTCTTCTGATCTCACTATTTTAGAGGATCATTTTGTTGCTGAGGATGCTTACAATTTCTTGGTGAATTGGCTACAAAGATTTCCACAGTTCAAATCCAGGGACTTTTATATAGCAGGAGAAAGCTATGCTGGTCACTATATTCCTCAGCTTGCAGAGTTAATCTTTGACAGAAACAAAGATAGAAACAGTTACCCTTTTATTAATCTTAAAGGTTTTATTGTGGGAAATCCAGAAACTGAAGATTACTATGATTATAAAGGCCTTCTAGAATATGCATGGAGTCATGCAGTTATATCAGATCAGCAATATGAAAAAGCAAAACAAGTTTGTGATTTTAAACAATCTCTATGGTCTGATGAGTGCAATCAAGTCATGAGTCAACTCTTCCATGATTACTCAGAAATTGACATATACAATATTTATGCCCCAGCATGCCGTTTAAATAAAACATCTTCAGTAACAAGTAATGTCCCTGAATCACTTACAAAGGTGAAAAATGATTATAAACTAAAGAGGATGAGAATATTTGGGGGCTATGATCCTTGTTATTCCAAATATGTAGAAGAATTTTTCAATAGGGTAGATGTTCAATCATCTTTTCATGCAAATAATAATAAAAGAGAAAACGGTAACATAGCATGGAAGGTTTGCAATGATTCCATATTGGGGACTTACAACTTCTCTGTTTTTTCTGTCCTACCCATCTACACTAAACTCATCAAGGGTGGCCTTAAGATATGGATCTATAGTGGAGATGCAGATGGGAGATTACCTGTGATAGGGACAAGATATTGTGTTGAGGCTTTAGGATTACCTCTAAAATCTACTTGGAGGCCTTGGTACCACCATAATCAGGTTCTCTATATAAACGAGTTTTACACATTCATTTGA 1317 0.3645 MNVFLFVLQFLSFILLTTPTKASEINVESYESDRITNLPGQPSTPSVSHFSGYITVNQEHGRALFYWFFEAQSEPSNKPLLLWLNGGPGCSSIGYGAVVEIGPLLVNKNGEGLNFNSYSWNQEANLLFVESPVGVGFSYTNTSSDLTILEDHFVAEDAYNFLVNWLQRFPQFKSRDFYIAGESYAGHYIPQLAELIFDRNKDRNSYPFINLKGFIVGNPETEDYYDYKGLLEYAWSHAVISDQQYEKAKQVCDFKQSLWSDECNQVMSQLFHDYSEIDIYNIYAPACRLNKTSSVTSNVPESLTKVKNDYKLKRMRIFGGYDPCYSKYVEEFFNRVDVQSSFHANNNKRENGNIAWKVCNDSILGTYNFSVFSVLPIYTKLIKGGLKIWIYSGDADGRLPVIGTRYCVEALGLPLKSTWRPWYHHNQVLYINEFYTFI 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00475 438 Pfam Serine carboxypeptidase 39 425 IPR001563 GO:0004185|GO:0006508
Car07g00475 438 ProSitePatterns Serine carboxypeptidases, serine active site. 179 186 IPR018202 GO:0004185
Car07g00475 438 PANTHER CARBOXYPEPTIDASE 13 428 - -
Car07g00475 438 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 428 IPR001563 GO:0004185|GO:0006508
Car07g00475 438 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 190 IPR001563 GO:0004185|GO:0006508
Car07g00475 438 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Car07g00475 438 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Car07g00475 438 Gene3D - 324 363 - -
Car07g00475 438 Gene3D alpha/beta hydrolase 29 289 IPR029058 -
Car07g00475 438 Gene3D - 374 436 - -
Car07g00475 438 SUPERFAMILY alpha/beta-Hydrolases 35 427 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00475 Car-Chr7 4226907 4230672 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00475 356 428 Calmodulin-binding Proteins AT2G22960 32.877 7.73e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00475 K16297 - gmx:100792930 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00475 07 4226907 4230672 Car07g00475 07 4226907 4230672 ECH