Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00467 ATGGTACCGGAAGCGGAAATTATATGTCAACAGAGTATTTCCATGTTGGATGTGAAGTATCACCTTTGTGTAGCACAAGAACACATCGTCAAAGTTGAGGTTTCACCCACCTCTCCTACTCCTTCTGTCCCAATCTTTGCCCATGCTGTGAGTTGCTCTGAGATCATTAAAGATTCCATGATGGAGACCCCTGCAAAAATGTTTATCCCGAATGTGCGTTCTGGCAGCTATGCTGAAATAGGGCCGCGGGGATCTATGGATGATGAACACATTCAGATAGATGATCTAGCTTGCCACCTTGGATTTGTGTTTAAGTACCCAATACCGAGTGCGTTTTATGCAGTTTTTGATGGGCATGGAGGGCCTGATGCTGCTGCCTATGTTAAGAGGAATGCTATGAGATTATTTTTTGAAGATGCTGATATGCTGCAATCATATGATGATGATACTAATACATTATTTCTAGAGAAGTTGGAGGATTCTCATCGGAGAGCTTTTATACGGGCGGATCTTGCCTTGGCTGATGAACAAAGTGTTAGTAGCTCATGTGGGACTACGGCACTGACTGCCCTTGTACTTGGAAGGCATTTGCTTGTTGCTAATGCTGGTGACTGTCGTGCAGTTCTTTGCAGGAGAGGTGCAGCTGTTGAGATGTCTCAAGATCACAGGCCAAGTTATTTACCTGAACGAAGGAGAGTGGAGGAGTTAGGTGGTTTCATTGATGACGGATATCTCAATGGTTATCTCTCGGTAACCCGTGCTCTTGGGGATTGGGACTTAAAATTTCCACTTGGTGCTGCATCTCCTCTTATTGCTGAGCCAGATGTTCAACTGGTTACATTGACAGAAGAGGATGAGTTCTTGATCATTGCGTGTGATGGGATTTGGGATGTAATATCTAGCCAAGTTGCAGTCAGTCTTGTTCGCCGTGGATTAAGAAGGCACAGCGACCCACATCAAAGTGCCAGAGAGCTAGTAAAGGAGGCACTGCGCCTAAATACATCAGATAACCTCACTGTGATTGTTATATGCCTGTCACCCATTGAAAGCATTGCCGAATCATGTCCGCCCCAAAGGAGAAGATTCAAAGCTTGCAGTATTTCTGAAGAGGCTCGAAATAGATTGAAGAGCCTGATAGAGGGAAATTGA 1149 0.4473 MVPEAEIICQQSISMLDVKYHLCVAQEHIVKVEVSPTSPTPSVPIFAHAVSCSEIIKDSMMETPAKMFIPNVRSGSYAEIGPRGSMDDEHIQIDDLACHLGFVFKYPIPSAFYAVFDGHGGPDAAAYVKRNAMRLFFEDADMLQSYDDDTNTLFLEKLEDSHRRAFIRADLALADEQSVSSSCGTTALTALVLGRHLLVANAGDCRAVLCRRGAAVEMSQDHRPSYLPERRRVEELGGFIDDGYLNGYLSVTRALGDWDLKFPLGAASPLIAEPDVQLVTLTEEDEFLIIACDGIWDVISSQVAVSLVRRGLRRHSDPHQSARELVKEALRLNTSDNLTVIVICLSPIESIAESCPPQRRRFKACSISEEARNRLKSLIEGN 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00467 382 ProSiteProfiles PPM-type phosphatase domain profile. 73 345 IPR001932 -
Car07g00467 382 Gene3D - 57 348 IPR036457 -
Car07g00467 382 SUPERFAMILY PP2C-like 66 347 IPR036457 -
Car07g00467 382 PANTHER PROTEIN PHOSPHATASE 2C 1 369 IPR015655 GO:0004722|GO:0006470
Car07g00467 382 SMART PP2C_4 63 343 IPR001932 -
Car07g00467 382 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 1 369 - -
Car07g00467 382 ProSitePatterns PPM-type phosphatase domain signature. 112 120 IPR000222 GO:0043169
Car07g00467 382 CDD PP2Cc 72 345 IPR001932 -
Car07g00467 382 Pfam Protein phosphatase 2C 83 337 IPR001932 -
Car07g00467 382 SMART PP2C_SIG_2 88 345 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00467 Car-Chr7 4160839 4163522 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00467 1 381 PP2C-type Phosphatase Gene Family AT1G48040 54.987 4.47e-145 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00467 K14803 - gmx:100775577 660.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00467 07 4160839 4163522 Car07g00467 07 4160839 4163522 ECH
Car07g00467 07 4160839 4163522 Car01g00904 01 8176302 8178982 PCT