Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00454 ATGGAGTTAACTCCAAGAGGAAGAAATCAAGGTCATGTAGTGACCTTTGATAGAGATGCAGATTCTTTTGTGGAGGAAGATAAAGAGCTTCAGTCTAAATGGGCTGCTATTGAGAAACTACCAACTTTCAAAAGGATTAGAACTTCTTTTGTTGATGAAATCACTCAGGAAGAGAGTGGAAGTAGATGGCAAAGAAGTAGTAGTAAAAGGGTTGTTGATGTTACCAAACTTGGAGCTGTCGATAAGCGTTTGTTCATTGATAAGCTCATTAAGCATATTGAGAATGATAACCTTAATCTACTTCAGAAACTTAGAGAAAGGATGGAAAGAGTGGATGTGAAGTTACCTAGTGTGGAGGTGAGGTACAAGAACTTGAATGTAGAAGCAGAATGTGAAGTTGTTCAAGGGAAGCCACTCCCTACTCTATGGAACTCTTTTTCTAGCTTATTTTCAGATTTAGTGAAGACTATATCATGCAATTCCCAAGAAGCCAAGTTGGGTATTCTGAATGATGTCAGTGGCATCATAAAGCCATCAAGGCTTACTCTACTTCTTGGTCCACCTGGCTGTGGTAAAACTACCTTGCTAATGGCGCTCGCTGGAAAACTAGAGCAATCTCTTAAGgtttctggagaagtctctttcaatggtcacaagctagatgaatttgttcctcaaaaaacagcagcttatataagtcagtatgacctgcacattcctgagatgacagtgagggaaacaattgacttctcggcacgatgtcagggggtcggaaGCAGAGCTGATATAATGGCTGAAATCACCCGGAAAGAAAAAGAACAAGGAATCTTCCCTGACCCGGATATTGATACCTATATGAAGgctatttcagttgaaggacaaagcgaaaatcttcaaacagaatatgttttaaagatactcggattggatatctgtgctgacacactgattggagatgcactagatagaggcatttcaggtggacagaagaaaagactaactacaggagagatgattgtaggtcctataaaagcactttttatggatgaaatatcaactggcttagacagctccactacttttcaaatagttacatgtctccagcaattggcgcacctaacagatgcaacagcagtgctttctctcctccaaccagcaccagaaacctttgagttatttgatgatctaatattaatggcagaggggaagatagtataccatggcccccgcagtcaagcactccaattctttaaggattgcggtttctggtgcccggaaagaaaaggagtggcagactttcttcaagagGTAACCTCTAAGAAGGATCAAAGGCAATACTGGTACCGCACAGATATTCCTTACAGTTATGTTTCAGTGGATGAGTTCTCTCAGATCTTCAAAACAAGTTACTGGGGAAGAATGTTAGATGATGAGCTCTCACAGCCATATGATAAATCTCAATCCCATAAAAGTTCTTTATCATATAGCAAGTACTCCTTAggaaaatggggtttgtttaaagcttgtatgaagagggaggttcttctcatgaaacgaaactcgtttatctatatattcaaaactgtgcagCTTACACTCACTGCAATCATAACAATGACGGTCTTCTTGCGCACTCAGCTCGATATAGATTTGTTAGGATCAAACTATTTATTAGGTTCATTGTATTATACACTCGTACGCCTCATGACGaatggagttgccgagttgatcatgacgattactagactccccgttgtttataagcagaaagcgttctatctatatccagcttgggcttactgtcttccagcttccattctaaagattccattttcagttcttgatgctcttgtttggacatcaataacatattatgttataggatacagcccagaaataacaagGTTCCTCCGAATGTTCCTTTTGCTTATCACTCTTCATATGTCGTCAACCTCCATGTGTCGTTCCCTTGCCGCAGTTTTTAAAACTGATGTTGCAGCTACAACTGTTGGTTCCTTGGTCTTGGTACTCATGTTCTTGTTTGGAGGATTTATTATTCCTCGACCATCATTACCAaagtggttgaggtggggattctggctttctcccatgtcatatggagaaataggaatcacactcaatgaatttctcgctcctcgctggcagaagATTCAAGAGGGAAACATCACCATTGGAAGGGAGGTACTCAAGAGTCATGGTTTAGACTTCGATAGCAACTTCTACTGGATATCAATTGGAGCTTTACTCGGTTTCGCTGTAGTATTTGACATTCTATTTATCTTAGCATTGACATACTTAAAAGAGCCTAAGCAATCTCGAGCTTTAGTTTCAAAAAAGAGGCTGCCTCAACTAAAAGGAGGAGAAAGAAGCAATGAAGTTGAATTAAAAAATAAGTCAGTTGCAGTTGATATTAGCCACACATCAAAGGAAACTCAAAGCACAGGGAAAATGGTCTTGCCCTTTGAGCCACTGTCAATAGCTTTTAAGGATGTCCAGTATTTTGTCGACACTCCTCCGgagatgaaaaaacacggttccaatgagaaaaacctacaattgctatgtgatatcacgggagcctttaggccaggaattcttactgcgctaatgggagtcagtggagcagggaagacaacactcatggatgtcctttcaggaagaaaaactggaggtatcattgaaggagatataagaattggagggtaccctaaagtgcaaaagacattcgaaagagtttcaggttattgtgagcagaatgacatacattctccatatataacagtcgaagaatctgtcagatactcggcttggttgcggttgccaaaggagattgattcggctaaaaaagggaagtttgttgaagaagttcttgaaacaattgaacttgatgatataaaggatagtttagttggcatccctggccaaagtggcttatcaacagagcaacgtaaaagactaaccattgcggtggagcttgtatccaatccgtctataatttttatggatgaacctacatcaggtttggatgcacgagctgctgcagttgttatgcgtgcagtgaagaatgttgttggcactggtagaaccacggtttgcactatacatcagccaagcatcgatatatttgagacttttgatgagttgattctaatgaaatctggaggaaagataatttataatggaatgctaggccatcattcaagtaggctgattgaatattttcagagtataccgggagttccaaagatcaaggacaattataatcctgcaacttggatgttggaagctacctctgcagccgtagaagatgaacttaaaatagatttttcaattatatttaaagagtcgcaccttcaccaggatacacttgaattggtgagacagttaagtgaaccagcaccaggttcaaaagacttgcatttttccactcgcttcccgcaaaataacgtggggcagtttatggcatgcctatggaagcaacacttgtcctattggagaagtcccgagtacaacttaatacgattcgtgttcatgattgttgcagcaatactatttggggccgtattttggcaaaaagggaatgaaatAAACACTCAGCAGGATTTGTTCAATGTGTTTGGATCAATGTATATTGCTGTAATATTCTTGGGCATAAATTACTGTTCAACAATTCTACCATATGTGGCAACTGAGCGCAGTgtcttgtaccgagaaaaatttgcaggaatgtattcttccatggcttattcgtttgcacaggtggctattgaaataccatatatcttagtgcaagcaattttatatgtggctatcacatatccaatgataggtttccattggtcagttcagaaggtgttttggtacttctacaccacattcTGCACATTTTTATACTTTGTGTATCTTGGAATGCTGATAATGTCATTAAGCTTAAATCTGGATCTAGCTTCTGTATTGTCAACTGCAGTCTACACCATATTCAATCTCTTTTCTGGATTCCTCATGCCAGGACCTaaaattcctaaatggtgggtttggtgctactggatctgccctacagcatggtccttgaatggcctcctaacttcacaatatggagacatggacaaAGAAATACTCATATTTGGAGACAAAAAACCTGTCGGTTCCTTTCTAAAGGATTACTATGGATTCAGACATGACAGATTAAGCGTTGTGGCTGTGGTGCTCATTGCTTACCCAATTATTTATGCCTCTCTCTTTGCCTATTGCATAGGGAAAATAAATTACCAAAAGAGATAG 4302 0.1801 MELTPRGRNQGHVVTFDRDADSFVEEDKELQSKWAAIEKLPTFKRIRTSFVDEITQEESGSRWQRSSSKRVVDVTKLGAVDKRLFIDKLIKHIENDNLNLLQKLRERMERVDVKLPSVEVRYKNLNVEAECEVVQGKPLPTLWNSFSSLFSDLVKTISCNSQEAKLGILNDVSGIIKPSRLTLLLGPPGCGKTTLLMALAGKLEQSLKVSGEVSFNGHKLDEFVPQKTAAYISQYDLHIPEMTVRETIDFSARCQGVGSRADIMAEITRKEKEQGIFPDPDIDTYMKAISVEGQSENLQTEYVLKILGLDICADTLIGDALDRGISGGQKKRLTTGEMIVGPIKALFMDEISTGLDSSTTFQIVTCLQQLAHLTDATAVLSLLQPAPETFELFDDLILMAEGKIVYHGPRSQALQFFKDCGFWCPERKGVADFLQEVTSKKDQRQYWYRTDIPYSYVSVDEFSQIFKTSYWGRMLDDELSQPYDKSQSHKSSLSYSKYSLGKWGLFKACMKREVLLMKRNSFIYIFKTVQLTLTAIITMTVFLRTQLDIDLLGSNYLLGSLYYTLVRLMTNGVAELIMTITRLPVVYKQKAFYLYPAWAYCLPASILKIPFSVLDALVWTSITYYVIGYSPEITRFLRMFLLLITLHMSSTSMCRSLAAVFKTDVAATTVGSLVLVLMFLFGGFIIPRPSLPKWLRWGFWLSPMSYGEIGITLNEFLAPRWQKIQEGNITIGREVLKSHGLDFDSNFYWISIGALLGFAVVFDILFILALTYLKEPKQSRALVSKKRLPQLKGGERSNEVELKNKSVAVDISHTSKETQSTGKMVLPFEPLSIAFKDVQYFVDTPPEMKKHGSNEKNLQLLCDITGAFRPGILTALMGVSGAGKTTLMDVLSGRKTGGIIEGDIRIGGYPKVQKTFERVSGYCEQNDIHSPYITVEESVRYSAWLRLPKEIDSAKKGKFVEEVLETIELDDIKDSLVGIPGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAVVMRAVKNVVGTGRTTVCTIHQPSIDIFETFDELILMKSGGKIIYNGMLGHHSSRLIEYFQSIPGVPKIKDNYNPATWMLEATSAAVEDELKIDFSIIFKESHLHQDTLELVRQLSEPAPGSKDLHFSTRFPQNNVGQFMACLWKQHLSYWRSPEYNLIRFVFMIVAAILFGAVFWQKGNEINTQQDLFNVFGSMYIAVIFLGINYCSTILPYVATERSVLYREKFAGMYSSMAYSFAQVAIEIPYILVQAILYVAITYPMIGFHWSVQKVFWYFYTTFCTFLYFVYLGMLIMSLSLNLDLASVLSTAVYTIFNLFSGFLMPGPKIPKWWVWCYWICPTAWSLNGLLTSQYGDMDKEILIFGDKKPVGSFLKDYYGFRHDRLSVVAVVLIAYPIIYASLFAYCIGKINYQKR 1433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00454 1433 Pfam ABC transporter 169 351 IPR003439 GO:0005524
Car07g00454 1433 Pfam ABC transporter 863 1013 IPR003439 GO:0005524
Car07g00454 1433 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 148 426 IPR003439 GO:0005524
Car07g00454 1433 Pfam ABC-2 type transporter 505 716 IPR013525 GO:0016020|GO:0140359
Car07g00454 1433 Pfam ABC-2 type transporter 1159 1371 IPR013525 GO:0016020|GO:0140359
Car07g00454 1433 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 833 1086 IPR003439 GO:0005524
Car07g00454 1433 Pfam Plant PDR ABC transporter associated 721 783 IPR013581 -
Car07g00454 1433 CDD ABCG_PDR_domain2 830 1068 IPR034003 -
Car07g00454 1433 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 857 1067 IPR027417 -
Car07g00454 1433 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 2 1433 - -
Car07g00454 1433 SMART AAA_5 870 1062 IPR003593 -
Car07g00454 1433 SMART AAA_5 178 410 IPR003593 -
Car07g00454 1433 CDD ABCG_PDR_domain1 165 408 IPR034001 -
Car07g00454 1433 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 426 IPR027417 -
Car07g00454 1433 PANTHER ATP-BINDING CASSETTE TRANSPORTER 2 1433 - -
Car07g00454 1433 Gene3D - 152 419 IPR027417 -
Car07g00454 1433 Gene3D - 847 1079 IPR027417 -
Car07g00454 1433 Pfam ABC-2 type transporter 1042 1109 IPR043926 GO:0140359
Car07g00454 1433 Pfam ABC-2 type transporter 384 437 IPR043926 GO:0140359
Car07g00454 1433 Pfam ABC-transporter N-terminal 79 144 IPR029481 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00454 Car-Chr7 3974068 3983534 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00454 857 1045 Calmodulin-binding Proteins AT2G36910 27.941 4.00e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00454 K08711 - gmx:100779615 2499.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00454 07 3974068 3983534 Car07g00454 07 3974068 3983534 ECH