Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00452 ATGGGTTGCTTTGGATTCTGCAAACAGAATGATACTTACACAAATTCTGACAAAGGACACTTCATGCATACCAATTCTATCGGGAACTCCAGTTATCAAGGGAGACACACAGCAATAACCATTCCTCGCCCTATAACTCTCCAACCTATTTCTGTCCCTTCCTTTACAGTTGATGAATTAAGGTCAATGACAGATAATTTTGGTTCAAAGTCTTTCATTGGTGAGGGTGCATATGGGAAAGTATATCGCGCCACATTGAAAACTGGACATGAAGTCGCAATTAAAAAGTTGGATTCTAGTAAACAGCCAGACCAAGAATTTCTTTCTCAGGTCTCCATCGTATCAAGGCTAAAGCATGAAAACGTTATTGAACTTGTCAGTTATTGTGTTGATGGTCCTTTGCGTGCCCTTGCCTATCAGTATGCTCCTAATGGATCCCTTCATGATATGCTACATGGACGGAAAGGTGTCAAGGGTGCAGAACCTGGTGCAGTTCTGTCATGGGCTCAAAGAGTTAAAATCGCTGTTGGAGCAGCCAGAGGACTTGAATATCTTCATGAAAAGGCAGAGGTTCATATTGTCCATCGTTACATTAAATCTAGTAACATACTTCTATTCGAGGACGACGTTGCAAAGATTGCTGATTTTGATCTGTCAAACCAAGCCCCTGATGCTGCAGCACGTCTTCATTCTACCCGTGTTCTTGGAACATTTGGCTATCACGCTCCAGAATATGCAATGACTGGAAACCTCAATTCAAAGAGCGATGTTTACAGTTTTGGAGTTATACTGTTGGAACTCTTAACTGGACGTAAACCTGTTGATCACACCCTGCCCCGAGGACAGCAAAGCCTTGTGACATGGGCAACGCCAAGGCTTAGTGAAGATAAAGTGAAGCAATGTGTTGATGTTAGATTGAAGGGAGAGTACCCATCCAAGTCAGTTGCAAAGATGGCTGCTGTTGCTGCACTATGTGTTCAATATGAAGCTGAGTTTCGACCAAATATGAGCATCATTGTCAAAGCTTTACAGCCTCTACTCAATACTCGCTCTGCTCAACCAAAGGAACCACGCAACTTGTAA 1083 0.4275 MGCFGFCKQNDTYTNSDKGHFMHTNSIGNSSYQGRHTAITIPRPITLQPISVPSFTVDELRSMTDNFGSKSFIGEGAYGKVYRATLKTGHEVAIKKLDSSKQPDQEFLSQVSIVSRLKHENVIELVSYCVDGPLRALAYQYAPNGSLHDMLHGRKGVKGAEPGAVLSWAQRVKIAVGAARGLEYLHEKAEVHIVHRYIKSSNILLFEDDVAKIADFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGNLNSKSDVYSFGVILLELLTGRKPVDHTLPRGQQSLVTWATPRLSEDKVKQCVDVRLKGEYPSKSVAKMAAVAALCVQYEAEFRPNMSIIVKALQPLLNTRSAQPKEPRNL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00452 360 SUPERFAMILY Protein kinase-like (PK-like) 46 343 IPR011009 -
Car07g00452 360 PIRSF ILK 33 356 - -
Car07g00452 360 CDD STKc_IRAK 73 346 - -
Car07g00452 360 Pfam Protein tyrosine and serine/threonine kinase 72 343 IPR001245 GO:0004672|GO:0006468
Car07g00452 360 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 356 - -
Car07g00452 360 Gene3D Transferase(Phosphotransferase) domain 1 142 358 - -
Car07g00452 360 ProSiteProfiles Protein kinase domain profile. 67 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00452 360 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Car07g00452 360 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 356 - -
Car07g00452 360 Gene3D Phosphorylase Kinase; domain 1 30 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00452 Car-Chr7 3966552 3969738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00452 48 349 Receptor kinase-like Gene Family AT4G02010 48.101 9.57e-89 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Car07g00452 PK_Tyr_Ser-Thr 1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00452 K13436 - gmx:547596 621.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00452 07 3966552 3969738 Car07g00452 07 3966552 3969738 ECH