Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00451 ATGGCATCTGATCTGAGCTCGAGGTTGTCGAAGAAAACATCTGTTTTTGGGTTGGAAGCATGGGAATTAATGGGGATAATAGTTGGTTTGTTCATTATAATCATTCTTCTGGTTTTATCAATATGTCTCACTTCAAAAAAGAAATCCAAAAGAGTCAAGGACATACTTCCCCTAAGCCACAGGTTATCTGTTTCCGAAGAGATCAAAGAGATTAGAGTTGATCAGATTTCAACAAACCAGAATGGCGCTTTCATGAGTCTTTACGACAAGTTTAACGACAAAGAGTCTGAAAAGGTTTTGCTCCAAACAAAGAATGGGGAATATAGCAGTCAATCAGGTTCGTTTATTCACGCAGAGAAAGACGCAGCTGGATCTCAATCAGGCGAAGAAAGCGGTGCTAAGTCTCTTTCTGCACACAGGCCTTCTTTAACCTCGCCTTCCCCTTTGTCGGGTCTTCCTGAGTTCTCTCATCTTGGCTGGGGGCACTGGTTTACATTGAGAGACCTAGAACTTGCAACAAACAAGTTTTCGAAGGATAATGTTATTGGTGAAGGTGGATATGGAGTTGTTTATCAAGGCCAGCTGATCAATGGGAATCCAGTGGCTATTAAGAAGCTACTCAATAATCTTGGACAAGCTGAAAAGGAATTTAGAGTGGAAGTTGAGGCTATTGGTCATGTGAGGCACAAGAACTTGGTTAGACTTTTGGGTTTTTGCATTGAAGGCACTCACAGGTTGTTGGTTTATGAGTATGTTAACAATGGAAATTTAGAGCAATGGCTTCATGGAGCCATGCGGCAATATGGTTTTCTCACATGGGAGGCTCGGATTAAAATTCTTCTTGGAACAGCTAAAGCGCTGGCTTACTTGCACGAAGCAATTGAACCGAAAGTTGTCCATCGAGATATTAAGTCAAGTAACATTCTAATTGATGATGACTTCAATGCCAAAATATCTGACTTTGGACTGGCTAAGTTACTCGGTGCTGGAAAAAGTCACATTACGACTCGAGTAATGGGTACTTTTGGATATGTGGCTCCAGAATATGCCAATTCCGGCTTACTAAACGAGAAGAGTGATGTTTATAGCTTTGGCGTATTGCTCCTTGAAGCAATTACTGGAAGAGATCCAGTGGATTATAGCCGTTCAGCAGCCGAGGTAAATTTGGTCGACTGGCTCAAGATGATGGTAGGTAATAGGCGCGCAGAAGAGGTTGTGGATCCAAACATTGAGACCAGACCATCAACAAGTGCCCTTAAACGAGTCCTTTTGACTGCTTTAAGGTGTGTTGACCCAGATTCTGAAAAAAGACCAAAAATGAGTCAAGTGGTCCGCATGCTTGAGTCCGAAGAATATCCCATACCTAGAGAGGATCGAAGACGAAGGAAGAGTAATGCCAGAAGTGCTGATGTGGAGGCTTCTGATACAGATAAGAGTGATCATCCAGATTCCAAGTTGAATGGAAGAAGGAATCAACGGAAGTAA 1485 0.4229 MASDLSSRLSKKTSVFGLEAWELMGIIVGLFIIIILLVLSICLTSKKKSKRVKDILPLSHRLSVSEEIKEIRVDQISTNQNGAFMSLYDKFNDKESEKVLLQTKNGEYSSQSGSFIHAEKDAAGSQSGEESGAKSLSAHRPSLTSPSPLSGLPEFSHLGWGHWFTLRDLELATNKFSKDNVIGEGGYGVVYQGQLINGNPVAIKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGFCIEGTHRLLVYEYVNNGNLEQWLHGAMRQYGFLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRSAAEVNLVDWLKMMVGNRRAEEVVDPNIETRPSTSALKRVLLTALRCVDPDSEKRPKMSQVVRMLESEEYPIPREDRRRRKSNARSADVEASDTDKSDHPDSKLNGRRNQRK 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00451 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 298 310 IPR008271 GO:0004672|GO:0006468
Car07g00451 494 MobiDBLite consensus disorder prediction 128 147 - -
Car07g00451 494 CDD STKc_IRAK 182 448 - -
Car07g00451 494 Gene3D Transferase(Phosphotransferase) domain 1 252 464 - -
Car07g00451 494 Gene3D Phosphorylase Kinase; domain 1 157 251 - -
Car07g00451 494 PANTHER RECEPTOR-LIKE KINASE PLANT 2 494 - -
Car07g00451 494 SMART serkin_6 176 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00451 494 SUPERFAMILY Protein kinase-like (PK-like) 160 455 IPR011009 -
Car07g00451 494 Pfam Protein kinase domain 177 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00451 494 PANTHER OS01G0323000 PROTEIN 2 494 - -
Car07g00451 494 ProSitePatterns Protein kinases ATP-binding region signature. 182 205 IPR017441 GO:0005524
Car07g00451 494 MobiDBLite consensus disorder prediction 119 147 - -
Car07g00451 494 MobiDBLite consensus disorder prediction 435 494 - -
Car07g00451 494 ProSiteProfiles Protein kinase domain profile. 176 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00451 Car-Chr7 3961494 3966079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00451 17 450 Trihelix Transcription Factor Family AT1G70460 40.547 7.06e-94 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Car07g00451 Pkinase 2.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00451 - - gmx:100793499 830.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00451 07 3961494 3966079 Car07g00451 07 3961494 3966079 ECH
Car07g00451 07 3961494 3966079 Car01g01345 01 19153959 19158895 PCT