Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00447 ATGGTGATATTAAACCTTGGGAGGAAACAGAATAAGATGAATTTGCAGAAAGAAGGAGTGAGACTTGGGAAATATGAGTTAGGAAGAACTCTTGGTGAAGGAAATTTTGGTAAAGTCAAGTTTGCTAAGAACACCGATTCTCAACAACCTTTTGCTATTAAGATTATTGACAAGAACAAGATCATTGATCTTAATATCACTAGCCAGATAAAAAGGGAAATAAGTGCCTTAAAGCTCCTAAGGCATCCCAACGTTGTTAAATTATACGAGGTGTTGGCTAGCAAAACAAAAATTTACATGGTACTTGAGTACGTGACAGGAGAGGAGTTATTTCACAAGATTgcatccaagggtaaacttaccgaaagtgaaggtagaaagttgttccagcagttgattgatggtgtgagttactgccatagtaaagatgtcttccatagggatctcaagcttgagaatgtacttgtggatgccaaaggtaatgtaaagataactgattttggccttagtgctttaccccaacaatataggGCAGATGGGTTGTTGCATACAACATGTGGAAGTCCAAATTATGTTGCACCAGAGATTCTTGCTAATAGAGGCTATAATGGTGCATCATCAGATGTATGGTCATGTGGTGTTATCTTGTATGTAGTCCTAACAAGATGCCTTCCTTTTGATGATAGAAATCTTGCAGTTCTTTATCAGAAGGTTTTGAAAGGAGATGTTCATATACCAAAATGGTTATCACATGGTGCGCAAAACATTATAAAGAGAATTCTTGATCCCAACCCTGAAACCAGGATAACGATGACGGGGATCAAAGAAGATCCATGGTTTAAGGAGGGATATATCCCGGCAGATCCTgaggaggaggaggaggaggaggaTGTGTATGTAGATGATGAAGCCTTTTCCGTTCATGCATTGCCATATGAAGAAGAAAAGAGGAGTCCAGGATCGCCAATCCGTATCAATGCGTTTCAGTTGATAGGGATGTCTTCATGCTTAGACCTCTCTGGGTTTTTTGAGAAAGAGGATGTATCTGAGAGGAAGATAAGGTTTGCAACAAATATTTCAGCCAAAGATCTGATGGAGAAGATTGAATACACTGTGACAGAAATGGAATTTAGAGTACAAAAGAAAAATGGCAAAATGAAAGTGATACGAGAGAACAAGAGCATAAAACTGTTGGCAGCCTCTCAGTGA 1209 0.3168 MVILNLGRKQNKMNLQKEGVRLGKYELGRTLGEGNFGKVKFAKNTDSQQPFAIKIIDKNKIIDLNITSQIKREISALKLLRHPNVVKLYEVLASKTKIYMVLEYVTGEELFHKIASKGKLTESEGRKLFQQLIDGVSYCHSKDVFHRDLKLENVLVDAKGNVKITDFGLSALPQQYRADGLLHTTCGSPNYVAPEILANRGYNGASSDVWSCGVILYVVLTRCLPFDDRNLAVLYQKVLKGDVHIPKWLSHGAQNIIKRILDPNPETRITMTGIKEDPWFKEGYIPADPEEEEEEEDVYVDDEAFSVHALPYEEEKRSPGSPIRINAFQLIGMSSCLDLSGFFEKEDVSERKIRFATNISAKDLMEKIEYTVTEMEFRVQKKNGKMKVIRENKSIKLLAASQ 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00447 402 ProSiteProfiles Protein kinase domain profile. 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00447 402 SMART serkin_6 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00447 402 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Car07g00447 402 PANTHER SERINE/THREONINE KINASE 16 399 - -
Car07g00447 402 Pfam NAF domain 324 381 IPR004041 GO:0007165
Car07g00447 402 Pfam Protein kinase domain 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00447 402 Gene3D Kinase associated domain 1, KA1 324 400 - -
Car07g00447 402 SUPERFAMILY Protein kinase-like (PK-like) 21 298 IPR011009 -
Car07g00447 402 CDD CIPK_C 326 396 - -
Car07g00447 402 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 16 399 - -
Car07g00447 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Car07g00447 402 Gene3D Transferase(Phosphotransferase) domain 1 17 323 - -
Car07g00447 402 ProSiteProfiles NAF domain profile. 320 344 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00447 Car-Chr7 3932892 3938776 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00447 88 396 CBL-interacting serine-threonine protein kinases AT3G17510 71.197 5.66e-154 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Car07g00447 Pkinase 1.2e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00447 K07198 - gmx:100777468 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00447 07 3932892 3938776 Car07g00447 07 3932892 3938776 ECH
Car07g00447 07 3932892 3938776 Car01g01337 01 18895662 18902854 PCT