Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00442 ATGGAAATGGAAGGGGATATCAGTTTGAATGAAGATGTTGCAAGTATTCAACCAAAAGTAGGTTCTGACAGCAAGCAAGATTCAGAGAAGAACAAGGCTAAAGATGAAACCACAAATACAGTACCCTTATACAAGCTTTTCTCATTTGCTGATTCTTTGGATCATTTATTGATGTTTGTGGGGACTGTTGGTGCTATTGGGAATGGAATCTCCGTACCTTTGATGACTTTAATATTTGGAAGTATGATCAATGCATTTGGAGAATCTACAAACACTAAAGAAGTTGTTGATGAAGTTTCCAAGGTGTCCTTGAAATTCGTATACTTGGCTGCGGGTACCTTCACCGCGTCTTTTTTGCAATTGACTTGCTGGATGATCACTGGGGAGAGACAGGCTGCAAGAATTAGAGGCTTATACCTCCAAACAATTTTGAGGCAAGATGTGAGTTTCTTTGATGAGGAAACTAATACTGGAGAGGTTATTGGAAGAATGTCCGGTGATACTGTTCTTATTCAAGATGCCTTGGGTGAGAAGGTGGGGCAGTTTATACAATTAGGGGCTACTTTCTTTGGAGGTTTTGTGGTAGCATTCATAAAGGGATGGCTTCTAACTGTTGTCATGATGTCTAGTATACCATTTATTGTCTTGTTTGGTGCCATGACGAGCACAGTTATTGCAAAAGCATCATCATCTGGACAAACAGCTTATTCTAAAGCAGCAAGTGTAGTAGAGCAGACAGTTGGTTCTATCCGAACTGTTGCGTCTTTCACTGGAGAGAAACAAGCCATAGCTAAATATGATAATTCCTTAATTGATGCTTACAAAACTGTAGTGAAAGAGGCACTAGCTTCTGGTTTGGGGTTTGGTTCACTCTACCTTGTTATTATCTGCACTTATGGTTTGGCAGTATGGTTAGGCGGGAAAATGATAATAGAGAAAGGATACAAAGGAGGGGAAGTTGTAACTGTAATTTTTGCTGTATTGACTGGCTCCAGGTCACTGGGGCAGGCATCTCCATGCTTGAGTGCTTTTGCTGCAGGACAAGCTGCAGCCTTTAAGATGTTTGAAACGATTAAAAGGAAACCAGAAATCGATGCTTATGATACTACTGGGCGAAAGCTTGATGACATTCGCGGTGACATAGAGCTTAGAGAGGTTTGCTTTAGTTATCCTACAAGGCCAGATGAACTGATATTCAATGAGTTTTCTCTTTCAATACCTAGTGGGGCTACTGTAGCTTTGGTAGGGCAAAGTGGGAGTGGGAAGTCCACAGTTGTCAGTTTGATAGAGAGATTTTATGATCCACAAGCTGGTGAAGTTCTCATTGATGGTATCAACCTCAAAGAATTTCAACTGAAATGGATCAGACAGAAAATAGGCCTAGTTAGTCAGGAACCAGTTCTCTTTACTTGTAGCATTAAAGAAAATATTGCTTATGGCAAGGATGGTTCAACCGATGAAGAAATCAGAGCTGCAGCAGAACTTGCTAATGCCTCCAAATTTATAGATAAACTTCCTAAGGGACTAGACACAATGGTCGGTGAGCATGGAACTCAGCTCTCTGGGGGTcaaaagcaaagagttgcaatagcaagagcaatTTTGAAAGACCCAAGAATCCTACTTCTGGATGAAGCTACAAGTGCCCTTGATGCAGAATCTGAGAGAACAGTACAAGAGGCATTGGACAGAATAATGATAAATCGGACAACTATCGTCGTAGCTCACCGCTTAAGTACTATAAGAAATGTCGATACCATTGCTGTCATTCATCAAGGAAAATTAATTGAAAGAGGTTCACATGCTCAGCTCACAAGAGATCCTGATGGAGCCTATAGCCAGTTGATTAGACTGCAAGAAATGAAGGGGTCAGAACAGAATGCTGCAAATGACACAAACAAGTCAAACAGTATAGTGCTATCTGAGAGACGGTCAAGTCATAGATCTTTATCCTCAAGATCTATAAGCCAAGTATCATCTGGGGGTGGAAACAGCGATCGCCATTCGTTCTCAGCTTCATATATTGTGCCAGCCACAATAGTTGGCTTCTCAGAAACTGCAGACGGTGAACCTCAAGCTCCTCCTTCAACAGTTTCTTCACCACCAGAAGTATCACTTTATCGCCTGGCCAATTTGAACAAGCCTGAGATTCCAGTTTTATTGATGGGGGCTGTAGCTGCAGTGTTAAATGGAGTGATAATGCCCATTTTTGGGCTCTTGCTTTCTAAAATGATAAGTATTTTCTACGAGCCAGCTGACGAACTTCGTCACGATTCAAAAGTCTGGGCGTTAGTATTTGTCGCGCTTGGTGTGGCGTCGTTTTTCATTTTTCCATGCAGATTCTACTTTTTTGGCATTGCTGGAGGCAAGTTGATCAAAAGGGTAAGGAAAGTGTGTTTTGAGAAGGCAGTTAACATGGAAGTAAGTTGGTTCGATGAAGGTGAGCATTCAAGTGGAGCAATTGGAGCCAGGCTGTCAACCGATGCAGCTTCGATTCGAGCTTTGGTTGGTGATGCACTTGGTTTACTGGTTCAAAATATTGCTACAGCAATCGCTGGTTTGGTAATTGCTTTTGCAGCAAGCTGGCAGCTTGCTCTTATAATCCTTGCTATCGTGCCTCTACTAGCAATAAATGGATTTTTGCAAGTTAAGTTCTTGAAAGGATTCAGCACAGATTCAAAGAAATTGTATGAGGAAGCAAGTCAAGTTGCAAATGATGCAGTAGGGAGTATAAGAACAGTTGCTTCTTTCTGTTCTGAAGAGAAGGTGATGGAATTATATCAGCAAAAATGTGAAGGACCAATTAAGACAGGCATAAGGAGAGGGATAATAAGTGGATTTGGTTTTGGAATATCATTCTTCGTGTTTTATGCAGTTTATGCCTGCAGTTTTTATGCTGGAGCGCGTCTCGTTGAGGATGGAAAATCTTCATTCTCGGATGTTTTCCGAGTCTTTTTTGCTCTAAGCATGGCAGCTTTAGGACTATCTCAATCAGGGTCCTTGGTACCTGATTCAACTAAGGCAAAAAGTGCAGCTGCTTCCATATTTGCTATTCTTGATAGGAAATCACTCATAGATCCAAGTGATGAATCAGGAATGACATTGGAAGAAGTCAAGGGAGAAATTGAGTTTAACCATGTCAGTTTCAAGTATTCTACAAGACCTGATATTCAAATATTCAGAGATCTTTGCTTGAAAATTCATAGTGGCAAGACAGTAGCACTGGTTGGAGAAAGTGGAAGTGGAAAATCAACGGTTATCTCATTACTTCAAAGATTTTATGATCCAGACTCAGGTCACATTACACTTGATGGAAAAGAAATCCAAAGTCTACAAGTGAAATGGCTGAGACAACAGATGGGACTGGTAAGCCAAGAGCCTGTTCTTTTCAATGACACCATTAGAGCCAACATTGCATATGGAAAAGGAGGAGATGCATCAGAGGCAGAGATTATAGCTGCTGCAGAATTGGCAAATGCTCACAAGTTTATTAGTAGTTTGCAGAAGGTAAATTGTCGTCCATCTTAA 3528 0.407 MEMEGDISLNEDVASIQPKVGSDSKQDSEKNKAKDETTNTVPLYKLFSFADSLDHLLMFVGTVGAIGNGISVPLMTLIFGSMINAFGESTNTKEVVDEVSKVSLKFVYLAAGTFTASFLQLTCWMITGERQAARIRGLYLQTILRQDVSFFDEETNTGEVIGRMSGDTVLIQDALGEKVGQFIQLGATFFGGFVVAFIKGWLLTVVMMSSIPFIVLFGAMTSTVIAKASSSGQTAYSKAASVVEQTVGSIRTVASFTGEKQAIAKYDNSLIDAYKTVVKEALASGLGFGSLYLVIICTYGLAVWLGGKMIIEKGYKGGEVVTVIFAVLTGSRSLGQASPCLSAFAAGQAAAFKMFETIKRKPEIDAYDTTGRKLDDIRGDIELREVCFSYPTRPDELIFNEFSLSIPSGATVALVGQSGSGKSTVVSLIERFYDPQAGEVLIDGINLKEFQLKWIRQKIGLVSQEPVLFTCSIKENIAYGKDGSTDEEIRAAAELANASKFIDKLPKGLDTMVGEHGTQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESERTVQEALDRIMINRTTIVVAHRLSTIRNVDTIAVIHQGKLIERGSHAQLTRDPDGAYSQLIRLQEMKGSEQNAANDTNKSNSIVLSERRSSHRSLSSRSISQVSSGGGNSDRHSFSASYIVPATIVGFSETADGEPQAPPSTVSSPPEVSLYRLANLNKPEIPVLLMGAVAAVLNGVIMPIFGLLLSKMISIFYEPADELRHDSKVWALVFVALGVASFFIFPCRFYFFGIAGGKLIKRVRKVCFEKAVNMEVSWFDEGEHSSGAIGARLSTDAASIRALVGDALGLLVQNIATAIAGLVIAFAASWQLALIILAIVPLLAINGFLQVKFLKGFSTDSKKLYEEASQVANDAVGSIRTVASFCSEEKVMELYQQKCEGPIKTGIRRGIISGFGFGISFFVFYAVYACSFYAGARLVEDGKSSFSDVFRVFFALSMAALGLSQSGSLVPDSTKAKSAAASIFAILDRKSLIDPSDESGMTLEEVKGEIEFNHVSFKYSTRPDIQIFRDLCLKIHSGKTVALVGESGSGKSTVISLLQRFYDPDSGHITLDGKEIQSLQVKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDASEAEIIAAAELANAHKFISSLQKVNCRPS 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00442 1175 Gene3D ABC transporter type 1, transmembrane domain 45 636 IPR036640 GO:0005524|GO:0016021
Car07g00442 1175 CDD ABC_6TM_Pgp_ABCB1_D2_like 710 1025 - -
Car07g00442 1175 CDD ABC_MTABC3_MDL1_MDL2 381 619 - -
Car07g00442 1175 PANTHER - 23 1169 - -
Car07g00442 1175 CDD ABC_6TM_Pgp_ABCB1_D1_like 58 342 - -
Car07g00442 1175 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 381 617 IPR003439 GO:0005524
Car07g00442 1175 SUPERFAMILY ABC transporter transmembrane region 45 365 IPR036640 GO:0005524|GO:0016021
Car07g00442 1175 Pfam ABC transporter transmembrane region 58 331 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car07g00442 1175 Pfam ABC transporter transmembrane region 720 991 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car07g00442 1175 Gene3D ABC transporter type 1, transmembrane domain 1009 1031 IPR036640 GO:0005524|GO:0016021
Car07g00442 1175 Gene3D ABC transporter type 1, transmembrane domain 702 1008 IPR036640 GO:0005524|GO:0016021
Car07g00442 1175 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 23 1169 - -
Car07g00442 1175 SUPERFAMILY ABC transporter transmembrane region 708 1026 IPR036640 GO:0005524|GO:0016021
Car07g00442 1175 ProSitePatterns ABC transporters family signature. 520 534 IPR017871 GO:0005524
Car07g00442 1175 MobiDBLite consensus disorder prediction 1 36 - -
Car07g00442 1175 MobiDBLite consensus disorder prediction 623 667 - -
Car07g00442 1175 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 59 346 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car07g00442 1175 Pfam ABC transporter 400 548 IPR003439 GO:0005524
Car07g00442 1175 Gene3D - 1032 1169 IPR027417 -
Car07g00442 1175 Gene3D - 371 620 IPR027417 -
Car07g00442 1175 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 721 1007 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car07g00442 1175 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1031 1168 IPR027417 -
Car07g00442 1175 SMART AAA_5 408 594 IPR003593 -
Car07g00442 1175 SMART AAA_5 1069 1173 IPR003593 -
Car07g00442 1175 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 373 619 IPR027417 -
Car07g00442 1175 Pfam ABC transporter 1062 1159 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00442 Car-Chr7 3883832 3889816 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00442 28 625 Calmodulin-binding Proteins AT2G36910 35.880 6.36e-112 377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00442 07 3883832 3889816 Car07g00442 07 3883832 3889816 ECH