Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00440 GACAGACTTCTCCGATCTTAACTGCATTTTCTGCTGGACAAGCGGCTGCCTTTAAAATGTTTGAAACAATAAAGAGGCAGCCAAATATTGATGCTTATGACACTGCTGGTATGCAGCTAGATGATATTTATGGAGATATAGAATTTAGGGAGGTTTGCTTTAGTTATCCTTCAAGACCAAATGAAATGATTTTCAATGCATTTTCTATTTCAATATCAAGTGGCACTAGCACAGCTTTGGTAGGGCAAAGCGGGAGTGGCAAATCGACGGTTATTAGTTTGATAGAGAGATTTTATGATCCACAGGGTGGTGAAGTTCTCATTGACAATATCAACCTCAGAGAATTTCAACTGAAATGGATCAGACAGAAAATAGGCTTAGTCAGCCAGGAACCGGTTCTCTTTACTTGTAGCATTAAGGAGAATATTGCCTATGGTAAGGATGGAGCAACATATGAAGAAATTAGAGCTGCAGCTGAACTTGCTAATGCTTCTAACTTCATTGATAAATTTCCCAATGGACTTGAAACAATGGTTGGAGAGCATGGAGCTCAGCTTTCTGGTGGTcaaaagcaaagaattgctatagcaagagcaatTCTGAAAGATCCAAGAATTCTACTCCTTGATGAAGCAACAAGTGCTCTTGATGCCGAGTCTGAAAGAGTGGTACAAGAGACACTAGACAGAATCATGATAAACCGAACAACCATCACAGTAGCTCACCGCTTAAGCACAATAAGGAATGCTGATGTCATTGCTGTTATTCACCAAGGAAAAGTAGTAGAAAAAGGTACACATGCTGAGCTCACTAAAGATCCTGATGGAGCTTATAGTCAGCTCATTCGGTTTCAAGAAATTAAAAGGGATTCATCAGAACAGTATGATGCTAATGCCTCAGATAAACTACAGAACTTTGTAGTTTCTAGAAGAGAGTCAAGCTGGGGTTCATCTGGGATTGAAAACAGCAATCACCAGTCATTCAGAGTATCAAATCATATGTCTACTAGTACCACACTTGGTCTCTTTGAAACATCAGAAGAAGGGTCTGAAGTTGTTCCTTCTGCAGCATCACATAAAAGTAAAACTCCAGATATCTCATTTCGCCGCCTTGCTTATCTTAACAAGCAAGAAATCCCAGTGTTACTCATAGGGACTCTAGCAGCCGCGGTAATTGGGGCAATGCTGCCAATTTATGGACTTCTAATCTCCAAGATGATAATTACATTCTTTGAGCCTGCAGACAAACTCCGTAAAGACTCAAAGTTTTGGGCATTAATATATGTTGCCCTTAGTGTGGCTTCATTCGCTCTTCATCCATTGAGGTCCTACTTTTTCGCTGTAGCTGGTTCTAAGTTGATAAAAAAGATCCGGTTAATGTGCTTTGAGAAAATAATTCACATGGAAGTAGGCTGGTTTGATAAAGCTGAGCATTCAAGTGGTGCACTAGGTGCAAGGCTGTCAACTGATGCTGCTTCAATTCGAACTTTGGTTGGTGATGCACTTGGTTTGCTGGTTCAAGATATTGCTACAGTTGTTACTGCCTTGGTAATTGCCTTTGTGGCAAATTGGCAGCTTTCGCTCATTGTTCTTATTTTGTTACCTCTACTATTAGTAAATGGACATTTGCAAATCAAGTCCATGCAAGGATTCAGCACAGATGCAAAGAAACTATATGAAGAAGCAAGTCAAATAGCAAATGATGCAGTAGGTAATATCAGAACAGTTTCCGCTTTCTGTGCCGAAGAGAAGGTGATGGAGCTATACCAGAAGAAATGTGCAGTACCAGTCCAGACAGGAAAAAGGCATGGTTTAGTCAGTGGAGCTGGTTTTGGCTTATCAATCTTCTTTCTGTTTTGTGTCTATGCATGCAGTTTTTATGCCGGAGCACAACTTATTGAGAATGGCCAAACAACAATAACAGAATTTTTTCAAGTATTTTTCTCTCTCACATTGGCATCAGTGGCCATATCTCAATCTGGCTTAATGACTGCAGGAGCTAGTAAAGCAAAAACTTCTGCTGCTTCTATATTTGCTATTCTTGATCAGAAATCAAAAATAGACTCCAGTTATGAATCAGGAATGACATTGGAAGATGTGAAGGGAGAGATTGAATTCCGACATGTTACTTTCAAGTATCCATCTAGACCAGATGTTCATATATTCAAAGATCTTTCCTTAACCATACATTCAGGACAGACAGTTGCTCTAGTTGGTGAAAGTGGAAGTGGAAAATCAACAGTGATCTCATTATTGCAAAGATTTTATGATCCAGATTCAGGACAAATTAGGCTGGATGGAACAGAAATCCAAAAGCTACAGATTAGATGGTTTAGGCAGCAGATGGGGCTGGTAAGCCAGGAGCCCGTGCTGTTCAATGATACCATCCAAGCCAATATTGCATATGGAAAAGGTGGCAATGCAACAATGGCTGAAATTATAGCTGCAGCAGAACTAGCAAATGCTCATAAGTTCATTAGCAGCTTGCAGCAGGGGTATGATACAATAGTAGGGGAGAGAGGGATACAACTATCTGGAGGGCAGAAGCAGCGTGTGGCAATTGCAAGAGCCATAGTGAGCAGTCCAAGAATATTACTACTAGATGAAGCCACAAGTGCACTTGACGCTGAGTCTGAAAAAGTGGTTCAGGATGCACTTGATAGAGTGAGGGTTGACAGAACCACCATTGTGGTGGCTCATAGATTGTCTACCATAAAGGATGCAAATTCAATCGCAGTGATTAAAAATGGAGTGGTTGAAGAGAAAGGAAAGCACGACACCTTGCTCAACAAGGGTGAAATAGTAATCGTGGAAGTTTTGGGAGAGAATATCCACTTCTGGTTTAAGCATGGATCCAGAAGCTGCGAGAAGGGCCAGAGAATCTTTGGACTTGGCATTTCACATGTCTAA 2909 0.4032 QTSPILTAFSAGQAAAFKMFETIKRQPNIDAYDTAGMQLDDIYGDIEFREVCFSYPSRPNEMIFNAFSISISSGTSTALVGQSGSGKSTVISLIERFYDPQGGEVLIDNINLREFQLKWIRQKIGLVSQEPVLFTCSIKENIAYGKDGATYEEIRAAAELANASNFIDKFPNGLETMVGEHGAQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQETLDRIMINRTTITVAHRLSTIRNADVIAVIHQGKVVEKGTHAELTKDPDGAYSQLIRFQEIKRDSSEQYDANASDKLQNFVVSRRESSWGSSGIENSNHQSFRVSNHMSTSTTLGLFETSEEGSEVVPSAASHKSKTPDISFRRLAYLNKQEIPVLLIGTLAAAVIGAMLPIYGLLISKMIITFFEPADKLRKDSKFWALIYVALSVASFALHPLRSYFFAVAGSKLIKKIRLMCFEKIIHMEVGWFDKAEHSSGALGARLSTDAASIRTLVGDALGLLVQDIATVVTALVIAFVANWQLSLIVLILLPLLLVNGHLQIKSMQGFSTDAKKLYEEASQIANDAVGNIRTVSAFCAEEKVMELYQKKCAVPVQTGKRHGLVSGAGFGLSIFFLFCVYACSFYAGAQLIENGQTTITEFFQVFFSLTLASVAISQSGLMTAGASKAKTSAASIFAILDQKSKIDSSYESGMTLEDVKGEIEFRHVTFKYPSRPDVHIFKDLSLTIHSGQTVALVGESGSGKSTVISLLQRFYDPDSGQIRLDGTEIQKLQIRWFRQQMGLVSQEPVLFNDTIQANIAYGKGGNATMAEIIAAAELANAHKFISSLQQGYDTIVGERGIQLSGGQKQRVAIARAIVSSPRILLLDEATSALDAESEKVVQDALDRVRVDRTTIVVAHRLSTIKDANSIAVIKNGVVEEKGKHDTLLNKGEIVIVEVLGENIHFWFKHGSRSCEKGQRIFGLGISHV 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00440 968 ProSitePatterns ABC transporters family signature. 185 199 IPR017871 GO:0005524
Car07g00440 968 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 703 940 IPR003439 GO:0005524
Car07g00440 968 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 284 IPR027417 -
Car07g00440 968 Gene3D ABC transporter type 1, transmembrane domain 1 638 IPR036640 GO:0005524|GO:0016021
Car07g00440 968 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 382 668 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car07g00440 968 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 46 282 IPR003439 GO:0005524
Car07g00440 968 Pfam ABC transporter 722 871 IPR003439 GO:0005524
Car07g00440 968 ProSitePatterns ABC transporters family signature. 843 857 IPR017871 GO:0005524
Car07g00440 968 Gene3D ABC transporter type 1, transmembrane domain 645 692 IPR036640 GO:0005524|GO:0016021
Car07g00440 968 CDD ABC_MTABC3_MDL1_MDL2 703 933 - -
Car07g00440 968 CDD ABC_6TM_Pgp_ABCB1_D2_like 371 686 - -
Car07g00440 968 Pfam ABC transporter transmembrane region 381 653 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car07g00440 968 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 933 IPR039421 -
Car07g00440 968 Gene3D - 44 301 IPR027417 -
Car07g00440 968 SUPERFAMILY ABC transporter transmembrane region 364 683 IPR036640 GO:0005524|GO:0016021
Car07g00440 968 SMART AAA_5 730 924 IPR003593 -
Car07g00440 968 SMART AAA_5 73 259 IPR003593 -
Car07g00440 968 Pfam ABC transporter 65 213 IPR003439 GO:0005524
Car07g00440 968 PANTHER TRANSPORTER ABC DOMAIN PROTEIN 1 933 - -
Car07g00440 968 Gene3D - 693 934 IPR027417 -
Car07g00440 968 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 693 932 IPR027417 -
Car07g00440 968 CDD ABC_MTABC3_MDL1_MDL2 46 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00440 Car-Chr7 3871201 3877621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00440 359 932 Calmodulin-binding Proteins AT2G36910 39.446 1.06e-128 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00440 K05658 - gmx:100777713 1424.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00440 07 3871201 3877621 Car07g00440 07 3871201 3877621 ECH