Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00429 ATGGGAACATTAGAACAACAAATTGATGCTTATCAAACCCAAtcatcttcatcttcttcttcttcAATTGATAGTAATAACTATCCTTCATCACTCTGCCTCTCAACTCTATGTAGAAAAAGAACTGATAATTTGAGCACTGACCTTAGACTTGGTCTAAGCATCTCTCCTCCTTCTTCTTCTCATCAATCTCAATTACCATTCATTTCAACAACACCAAGGGAGGAAGCATTTGACTGGCCACCAATTAAATCCACATTGAGGACCACATTGGTTGAGAAACAAAGCAATTTTCAGAGTCAAAAACCTTCTTTATTTGTCAAAGTTTATATGGAAGGCATTCCAATTGGTAGAAAATTAAATTTGTTGGCACATCATAGCTATGATGGACTTGTAAAAGCTCTTTGTCATATGTTTAGGACCATTATTCTCTGTCCTAACTCTCAACCACTTAATCCTCGGAATTTTCATGTCTTAACTTATGAGGATCAAGAAGGGGACTGGATGATGGTTGGAGATGTGCCTTGGGAGATGTTCTTGTCCAGTGTGAAGAGGCTGAAGATCACAAGAGCTAACAGCTGCTAG 585 0.3675 MGTLEQQIDAYQTQSSSSSSSSIDSNNYPSSLCLSTLCRKRTDNLSTDLRLGLSISPPSSSHQSQLPFISTTPREEAFDWPPIKSTLRTTLVEKQSNFQSQKPSLFVKVYMEGIPIGRKLNLLAHHSYDGLVKALCHMFRTIILCPNSQPLNPRNFHVLTYEDQEGDWMMVGDVPWEMFLSSVKRLKITRANSC 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00429 194 SUPERFAMILY CAD & PB1 domains 101 188 - -
Car07g00429 194 Gene3D - 98 194 - -
Car07g00429 194 ProSiteProfiles PB1 domain profile. 104 193 IPR000270 GO:0005515
Car07g00429 194 PANTHER AUXIN-RESPONSIVE PROTEIN IAA31 17 194 - -
Car07g00429 194 Pfam AUX/IAA family 67 190 IPR033389 -
Car07g00429 194 MobiDBLite consensus disorder prediction 1 27 - -
Car07g00429 194 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 17 194 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00429 Car-Chr7 3806647 3808048 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00429 107 188 B3 DNA Binding Superfamily AT2G46530 37.805 4.55e-12 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Car07g00429 AUX_IAA 3.9e-34 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00429 K14484 - gmx:100818083 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00429 07 3806647 3808048 Car07g00429 07 3806647 3808048 ECH