Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00428 ATGGCAATGTGCCAAACAAGTAAGAGTTTTGGAAGCATCAAGGTGCTATGGGTTTTGGGGTTTATAGGGTTGGTGATTGTGAAAGGGGTAGAGGGTTTGGAGAATGGTAATGTGACAGACATGCAATTTGTTGGGGGAAGAGGTTTCTACAATAGACCTTTGATGGTTGGTCTTACTCTTATAAATGGCGCTGCTGCTAAAGGAGCTGTTTGTCTTGATGGATCTTTACCGGGCTATCACTTCCACCGTGGATACGGATCAGGATCAAACAGTTGGCTGGTACATCTTGAGGGAGGAGGCTGGTGTGGAACTATCAGAAATTGCATTTACAGTAAGAAAACTCGTCACGGTTCATCAGTATTTATGGAAAAACAAATACCATTTATTGGGATATTGAGCAACAAAGCTGAGGAAAATCCAGATTTTTACAATTGGAATAGAGTTAAAGTTCGCTATTGTGACGGTGCATCATTTAGTGGGGACAGTCAAAATGAGGCAGCAAGGTTATATTTCAGAGGGCAACGTATCTGGCAAGTCGCTATGGAGGATTTAATGTCAAAAGGGATGCGCTATGCCACACAGGCTCTTCTATCTGGATGTTCTGCAGGAGGTTTAGCATCTATACTACATTGCGATGAATTTCGGGAATTGTTTCCCAGAACAACTAGAGTAAAGTGCTTTAGTGATGCTGGATTATTCCTTGACTCTGTTGATGTATCTGGCCGTCGAAGTTTAAGGAATTTGTTTGGAAGTGTAGTCACATTGCAGGGAGTGCATAAGAGCCTTCCAAGGAGTTGTACCAGTCACCTCAATCCAATTTTGTGCTTTTTCCCTCAGCATTTAATTGCCAGTGTTAGGACCCCACTATTTCTTCTCAATGCAGCTTATGATAGTTGGCAGATTCAAGCCAGTCTAGCTCCACCATCTGCTGACTGGCACTGGAATTGGTATGAATGCAGAAAAAATTTTGCACGTTGCAGTGCACCACAGATACAATATCTGCAAGGTAATTTCAATCAGAAGTTTCAAAGAGTAGCTGTTTCTAGTTTATTTAACTCTTTTTGTAATCTATATGTGGTTTGA 1083 0.4155 MAMCQTSKSFGSIKVLWVLGFIGLVIVKGVEGLENGNVTDMQFVGGRGFYNRPLMVGLTLINGAAAKGAVCLDGSLPGYHFHRGYGSGSNSWLVHLEGGGWCGTIRNCIYSKKTRHGSSVFMEKQIPFIGILSNKAEENPDFYNWNRVKVRYCDGASFSGDSQNEAARLYFRGQRIWQVAMEDLMSKGMRYATQALLSGCSAGGLASILHCDEFRELFPRTTRVKCFSDAGLFLDSVDVSGRRSLRNLFGSVVTLQGVHKSLPRSCTSHLNPILCFFPQHLIASVRTPLFLLNAAYDSWQIQASLAPPSADWHWNWYECRKNFARCSAPQIQYLQGNFNQKFQRVAVSSLFNSFCNLYVV 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00428 360 PANTHER NOTUM-RELATED 19 345 IPR004963 GO:0016787
Car07g00428 360 Pfam Pectinacetylesterase 53 344 IPR004963 GO:0016787
Car07g00428 360 PANTHER PECTIN ACETYLESTERASE 19 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00428 Car-Chr7 3795167 3800678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00428 55 336 Carbohydrate Esterase AT1G57590 72.695 1.36e-153 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00428 K19882 - gmx:100791571 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00428 07 3795167 3800678 Car07g00428 07 3795167 3800678 ECH
Car07g00428 07 3795167 3800678 Car03g02879 03 74112121 74115380 ECH