Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00421 ATGGCTTCTGCTGATAGTATCAACAATAATGTTGGTCAAAGAAGTGACAACATAAACAGCTTCCGTCATCAAGACTCTGTCAACAATTTCTCTGTTAACTGGCCAATGGCAGTTACTGGACAAAATGCAGTAACCCCTCAGTTTGCCATGCTCTATAATGGGAGTATGTGTGTATATGATGGAATTCCTGCTCAAAAGGTGCATGAAATAATGATGATGGCTTCTGCTAATGCCAAGTCTTCTGAAATGAAAAGTGGAATTCCCTTCACTTCTCTCATTTCCACTAGCCCTTCTTCTCCACAAGGAGGAACCTCTAATAATTTGGCTTCTCTTCAATCAGTCTCTTTTCCTGTTGAGAAGAGTTCCATTTGCAGGATTCAAGAATTTCCAATAACTCGCAGACAATCACTTCAAATGTTTCTTGAGAAGCGAAAAATCAGGCTAGGTAGCAAAGCACCTTATACCTCCTCAACATCAAAAAAGGTTAACAACGTTGAGAACAACTTCAGCTCAGTATTGAGGCTACTTGAGGGCAAATAG 540 0.4019 MASADSINNNVGQRSDNINSFRHQDSVNNFSVNWPMAVTGQNAVTPQFAMLYNGSMCVYDGIPAQKVHEIMMMASANAKSSEMKSGIPFTSLISTSPSSPQGGTSNNLASLQSVSFPVEKSSICRIQEFPITRRQSLQMFLEKRKIRLGSKAPYTSSTSKKVNNVENNFSSVLRLLEGK 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00421 179 Pfam tify domain 46 75 IPR010399 -
Car07g00421 179 SMART tify_2 41 76 IPR010399 -
Car07g00421 179 PANTHER DIVERGENT CCT MOTIF PROTEIN 12 170 - -
Car07g00421 179 ProSiteProfiles Tify domain profile. 41 76 IPR010399 -
Car07g00421 179 Pfam Jas motif 130 154 IPR018467 -
Car07g00421 179 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 12 170 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00421 Car-Chr7 3736293 3739299 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00421 39 170 Tify Gene Family AT5G20900 37.956 3.38e-21 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Car07g00421 tify 5.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00421 - K13464 gmx:100306655 149.828
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00421 07 3736293 3739299 Car01g01324 01 18379367 18382764 PCT