Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00419 ATGAACTTCCCCCTCCACCTTCTCACACCCTCTTATTTTCTCAATTACTCTTCAATGGGCTTCTACACTGAAGAATCCATCTCTGGTTTCACAATAAGCCAAGCCATATACGAAGCTGCTCTAATCATAGCAGTTCTTAGATGGGTCTTATGCTTAGTTTTCAAAGTAATCAAACACAGAAGAACAACTTCTATTCACACCCCCCAACAACACCCAACTTGTCATATGTTACCTTTGACCAGCTTTGGTGATATCAAAGACAGGCTTCCAGAAACTGAGGAAACATGTGCTGTTTGTTTGAACAAACTAAAAATGGAAGATGACGTTAGAGAATTGATGAATTGTTACCATGTTTTCCATATGGAATGTATAGATAAATGGTTGGAACATGGTCATGAAAATGAAAATCATAACCAAACTTGTCCACTTTGTAGAGCTCCTTTGTTTCTTGATTCTTGTTCAATTTCTTCAGAGTTTTCAAGCTGTGTTTCTCCTCCTCAACCTAGTTGGGCTGTTGAGAGAATTCTTTATCTCTTTGGTGATGATCTATTACCTTGTTAA 561 0.3779 MNFPLHLLTPSYFLNYSSMGFYTEESISGFTISQAIYEAALIIAVLRWVLCLVFKVIKHRRTTSIHTPQQHPTCHMLPLTSFGDIKDRLPETEETCAVCLNKLKMEDDVRELMNCYHVFHMECIDKWLEHGHENENHNQTCPLCRAPLFLDSCSISSEFSSCVSPPQPSWAVERILYLFGDDLLPC 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00419 186 PANTHER RING ZINC FINGER PROTEIN-RELATED 19 185 - -
Car07g00419 186 Pfam Ring finger domain 95 145 IPR001841 -
Car07g00419 186 CDD RING-H2 96 145 - -
Car07g00419 186 ProSiteProfiles Zinc finger RING-type profile. 96 145 IPR001841 -
Car07g00419 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 90 148 IPR013083 -
Car07g00419 186 SMART ring_2 96 144 IPR001841 -
Car07g00419 186 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 19 185 - -
Car07g00419 186 SUPERFAMILY RING/U-box 95 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00419 Car-Chr7 3725767 3726792 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00419 19 183 C3H Transcription Factor Family AT5G20885 41.758 7.32e-38 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00419 K16281 - gmx:100306203 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00419 07 3725767 3726792 Car07g00419 07 3725767 3726792 ECH