Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00415 ATGTCATTGGTGAAGAATCTACTTCTTCAAGTGGATCCTATCTCCGATCACTTCGAAACCAAACTTGGAAAGGATCGATTTCCTTCGTGGTTAAAAGACGCAGACATGAAGCTGTTGAAGACAAACGGAGTGACTGCGGACGCTGTTGTTGCAGCCGATGGGAGTGGAGACTACACTACCGTCATGGATGCGGTGATGGCAGCACCTGATAACAGCATGAAAAGATATGTTATATATGTGAAAAAAGGTGTTTATGTTGAAAATGTTGAGATTAAGAAGAAGAAATGGAATATTATGATAATTGGTGAGGGTATGGACGCCACTGTCATCTCCGGTAGTCGAAGCTATGGGGATGGTTGGACTACATTCCGATCAGCTACCTTTGCTGTTAGTGGCAGAGGGTTCATAGCACGCGATATTTCATTTCAAAACACTGCTGGCCCCGAGAAGCATCAAGCAGTGGCATTAAGATCAGACTCAGACCTATCTGTATTTTATCGGTGTGGAATTTTGGGTTACCAAGACAGTCTATATACTCACACCATGCGTCAATTCTACCGAGAATGTAAAATCAGTGGCACAGTTGATTTCATCTTTGGTGATGCGACTGCCATGTTTCAGAATTGTCAAATACTAGCGAAGAAAGGAATGGAAAAACAAAAGAACACAATCACAGCTCAGGGACGAAAAGACCCAAACCAACCGACCGGATTCTCGTTCCAATTTTGTAACATCTCGGCGGATTCCGACCTTTTACCATTGGTGGGAAGCATTCCAACATACCTTGGTAGACCTTGGAAGACATATTCGCGAACAATATTCATGCAATCCTACATGAGTAATGTGATATGGTCAGAAGGGTGGTTAGAGTGGAACGAAAGTTTCGCTCTAGACACATTGTATTATGCAGAGTATATGAACTCGGGAGCGGGTGCTGGGGTTGGTAACAGAGTGAAATGGCCAGGGTACCATGTTTTGAATGCTGCTAGCCAGGCTACTAGTTTCACTGTGGCTCAATTTATTGAGGGGAATCTTTGGTTACCTTCCACAGGTGTAACTTACACTGCTGGTTTGACTAATTAA 1083 0.4349 MSLVKNLLLQVDPISDHFETKLGKDRFPSWLKDADMKLLKTNGVTADAVVAADGSGDYTTVMDAVMAAPDNSMKRYVIYVKKGVYVENVEIKKKKWNIMIIGEGMDATVISGSRSYGDGWTTFRSATFAVSGRGFIARDISFQNTAGPEKHQAVALRSDSDLSVFYRCGILGYQDSLYTHTMRQFYRECKISGTVDFIFGDATAMFQNCQILAKKGMEKQKNTITAQGRKDPNQPTGFSFQFCNISADSDLLPLVGSIPTYLGRPWKTYSRTIFMQSYMSNVIWSEGWLEWNESFALDTLYYAEYMNSGAGAGVGNRVKWPGYHVLNAASQATSFTVAQFIEGNLWLPSTGVTYTAGLTN 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00415 360 ProSitePatterns Pectinesterase signature 1. 72 91 IPR018040 -
Car07g00415 360 Pfam Pectinesterase 47 344 IPR000070 GO:0030599|GO:0042545
Car07g00415 360 SUPERFAMILY Pectin lyase-like 44 357 IPR011050 -
Car07g00415 360 Gene3D - 41 358 IPR012334 -
Car07g00415 360 ProSitePatterns Pectinesterase signature 2. 191 200 IPR033131 -
Car07g00415 360 PANTHER PECTINESTERASE 18 358 - -
Car07g00415 360 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 18 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00415 Car-Chr7 3660586 3663082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00415 23 360 Carbohydrate Esterase AT3G43270 72.271 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00415 K01051 - gmx:100814987 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00415 07 3660586 3663082 Car01g01317 01 18269675 18274793 PCT