Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00414 ATGGCTAATTTATCTTCTAAAAAAGTCTTCCTTCTTCTTCTCTTAACAATCTTCCACTCACACACTTTAGCTTTCAACTCTTCAAATTTTTCCACAACAACATTACATGCAACAAAAATCTCTTCATTAAAATCAATCTGCAAAAAAACACCATACCCTCAAGTTTGCTTCAATTCATCAAAGCTTTCTATCTCAATAAACATAAATCCAAACATCATTAACATCCTTCTTCAGTCTCTCCAAGTAGCAATATCTGAATCCACAAAGCTTTTTTATGAACTCAACAATGCAGGACCAAACATCATAGAGAGCAAAAGAGGAGCACTACAAGATTGCAATGAGCTTCAACAATCAACATTGACTTCTCTAAAAAGATCATTTTCTGGAATCAGTTCTTCAGATTCTGGGAAGTTAATTGATGCAAGAACATACCTCAGTGCAGCACTTACCAACAAGATCACATGTTTAGAAAGCTTAGATTCTGCTTCAGGTACAATGAAACAAGTTCTAATGGATTCAGTGATCAACACTTACAAACATGTTAGTAATTCTCTTTCAATGCTTCCTCAGCCTGAAAAGAGAGCTTTGAAAGGGCATAAGAACCGGCGTTTGATTGATGCTTTGACATGGTTGTCAAGCAACAATAGACGTCGGTTCTTGGAAAGCACTGATGATGATGGTGTGATTGTTGTGGCTGCAGATGGAACTGGGAAGTTTAGCACCATCAATGAAGCTATTAACTTTGCTCCAAATAACAGCTATGGTAGGACAATAATCTATGTGAAAGAAGGGATATATGAAGAAAACGTTGAAATTCCAAATTATAAAACCAATATTGTTCTACTTGGTGATGGAAGTGATGTCACTCTCATTACTGGTAATAGAAGTGTTGTTGATGGCTGGACCACTTTCAGATCTGCAACTTTAGCTGTCTCTGGTGAAGGCTTTCTAGCACGTGACATAGCATTTGAGAACAAAGCAGGACCAGAAAAGCATCAAGCAGTAGCCTTAAGAGTGAATGCAGACTTAACAGCATTTTACAGATGCACCATATATGGTTACCAAGATACACTTTATGTCCATTCCTTTAGACAATTCTATAGAGAGTGTGACATATTTGGTACCATAGATTACATATTTGGAAATGCAGCAGTGATTCTTCAAGCATGCAACATTGTTTCAAGAATGCCATTACCTAACCAATTCACTGTCATAACTGCACAGTCAAGAGATTCACCTGATGAAGACACTGGAATCTCAATCCAAAACTGTTCAATACTTGCTACCACTGATTTGTATTCTAACTTCAATAACATCAAGAGTTACCTTGGTAGGCCTTGGAGGGTATATTCTAGGACTGTTTTCATTGAGTCTTACATTGATGTGTTTATTGATCCAATGGGATGGACAAAGTGGTCTGATGATGATGATGGTTTGGAGGACAGTTTATATTATGGAGAGTATGGAAATTATGGGCCTGGTTCAAGGACTGATGACAGAGTGAAATGGTCAGGATACCATTTAATGGATTATGACAGTGCTTATGAATTCACTGTTTCTGAGTTCATTGTTGGTGATGCTTGGCTTGGATCTACTTCTTTTCCTTATGATGATGGGATTTGA 1623 0.3728 MANLSSKKVFLLLLLTIFHSHTLAFNSSNFSTTTLHATKISSLKSICKKTPYPQVCFNSSKLSISININPNIINILLQSLQVAISESTKLFYELNNAGPNIIESKRGALQDCNELQQSTLTSLKRSFSGISSSDSGKLIDARTYLSAALTNKITCLESLDSASGTMKQVLMDSVINTYKHVSNSLSMLPQPEKRALKGHKNRRLIDALTWLSSNNRRRFLESTDDDGVIVVAADGTGKFSTINEAINFAPNNSYGRTIIYVKEGIYEENVEIPNYKTNIVLLGDGSDVTLITGNRSVVDGWTTFRSATLAVSGEGFLARDIAFENKAGPEKHQAVALRVNADLTAFYRCTIYGYQDTLYVHSFRQFYRECDIFGTIDYIFGNAAVILQACNIVSRMPLPNQFTVITAQSRDSPDEDTGISIQNCSILATTDLYSNFNNIKSYLGRPWRVYSRTVFIESYIDVFIDPMGWTKWSDDDDGLEDSLYYGEYGNYGPGSRTDDRVKWSGYHLMDYDSAYEFTVSEFIVGDAWLGSTSFPYDDGI 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00414 540 ProSitePatterns Pectinesterase signature 2. 372 381 IPR033131 -
Car07g00414 540 PANTHER PECTINESTERASE 8 539 - -
Car07g00414 540 SMART PMEI_2 38 187 IPR006501 GO:0004857
Car07g00414 540 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 190 IPR035513 -
Car07g00414 540 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 188 IPR035513 -
Car07g00414 540 CDD PMEI-like_3 45 187 - -
Car07g00414 540 PANTHER PECTINESTERASE 8 539 - -
Car07g00414 540 Pfam Pectinesterase 229 526 IPR000070 GO:0030599|GO:0042545
Car07g00414 540 Gene3D - 227 540 IPR012334 -
Car07g00414 540 Pfam Plant invertase/pectin methylesterase inhibitor 42 187 IPR006501 GO:0004857
Car07g00414 540 SUPERFAMILY Pectin lyase-like 227 537 IPR011050 -
Car07g00414 540 TIGRFAM PME_inhib: pectinesterase inhibitor domain 21 187 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00414 Car-Chr7 3655453 3657906 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00414 41 540 Carbohydrate Esterase AT2G26440 64.466 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00414 - K01051 gmx:102666380 779.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00414 07 3655453 3657906 Car07g00414 07 3655453 3657906 ECH