Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00405 ATGGCTTCGTCAGAGAATGAAATTTCTCACtctccttcttcttcttcttcatcttcttcttctgtctCTGACGAAATATCTCCTCCTTCCAATCTCTGTATGCAGAAGTTTAGGCTTTATGAGACTCGATCGAACTTTTACATGATAGGAAGGGACAAGAGCAGGACATACTGGAGGGTACTAAAGATTGACCGTCTAGATCCTTCTGAGCTAAATGTGCGTGAAGATTCCACCACATATACAGAAAGTGAATGTTCTGATCTTTTGAGGCGGATACATGAGGGAAACAAGTCCACTGGTGGACTGAAATTTGTTACAACTTGTTATGGAATTGTTGGGTTCATCAAATTTTTGGGACCTTACTACATGCTACTTATCACGAAAAGAAGGCAAATTGGTGCAATCTGTGGTCATGCAGTATATGCTATTTCAAAGACAGAGATGATTCCATTGCCGAATTCTTCTGTTCGGTCTGACATCATGAATTCTAAAAATGAAAACAGGTACAAGAAGCTTCTGTGCACCGTTGACCTTACGAAGGACTTCTTTTTCAGCTACTCATACCACATTATGCGTAGTCTTCAAAGGAACATGTGCGACAACGAGACAGGCCATGTCCTTTATGAGACCATGTTTGTCTGGAATGAGTTCCTAACTCGAGGAATTAGGAATCACCTCCAGAATACTATTTGGACAGTTGCACTAGTTTATGGCTTTTTTAAACAGGACACACTTGTGATATCTGGACGGGAGTTCATACTTACGCTCATTGCAAGAAGATCACGCCATTATGCTGGCACCAGGTATTTGAGGCGAGGTGTTAATGAGAAGGGCAGAGTAGCAAATGATGTTGAGACAGAACAGATAGTCTTTGAGGATGCTCCAGAAGGTCTTCCCATCCAAATTAGCTCTGTCATCCAGAATCGTGGCTCAATACCTCTTTTCTGGTCACAGGAAACTTCACGTCTAAATATTAAACCAGATATCATATTGTCAAAGAAGGACCAGAATTATCAAGCCACTAGACTCCACTTTGAAAATCTTGTCAAAAGATACGGAAATCCCATTATAATTTTGAATTTAATAAAGACCCATGAGAAGAGGCCTCGTGAGTCCATTCTTCGTCAAGAGTTTGCTAATGCCATAGATTTCATCAATAAAGATTTGTCTGAGGAGAACAGGCTTAGGTTCCTTCACTGGGACTTACACAAACATTTTCAGAGCAAAGCTACAAATGTGTTGTTGCTCCTAGGCAAAGTGGCTGCATATGCATTGGCGTTAACGGGTTTTTTCTATTGCCAAGCGTCATCAACCTTGACACCTGAAGACTGTCTAAAATGGCCACCTACAGATGATGCTGTCAAGGGAAGCTGTTCACCTACTAGACACACTGATTATGATAATGAGGATGCTAATGATTTAGAGAGGAAATCAAGTGATGAAATCAATGTTTCCGACGAAAATAATTCTGCCAAACCACCTAGGTTGCAGATGGGGGTGCTCAGGACCAACTGCATAGACTGCTTGGATCGCACAAATGTTGCACAATATGCATATGGATTGGCTGCTCTTGGCAACCAGCTTCACTCTCTGGGAATTATTGACCACCCTAAAATTGACCTCGATGACCCTGTAGCTAATGATTTGATGCGGTTTTATGAGAGGATGGGCGACACACTTGCGCATCAATACGGTGGTTCTGCTGCCCACAACAAGATATTCTCCGCGAGGAGGGGCCAATGGAGAGCTGCAACACAGTCTCAGGAGTTTTTTAGAACTCTTCAACGCTATTACAGCAATGCTTGGATGGATGCTGAGAAACAAGATGCAATCAATGTATTCCTGGGACATTTTCAGCCACAAGAGGGTAAACCTGCTCTATGGGAGACGAGTTCAGATCAGCACTATGATACAGGGAGACTTGGTGATGATGATGCAAGGTCATTTTTCAAAAGATCTTTCTCAGATGGAAACATTCTTCGTGACAGTTCTACGCCTATGTCAGCTCCAAATGTCAAGGACGAAAAATTCTCAAAACCAGGTTTCCCAGACCGAACAGGAGAAGGGAGCAAGGCCTTTTGTGAGTCATCACCTGAAATATCTACTACTGAGACTGAAAGCGACATTTCATTTTCAAGATACACTCCCTCAATGCCTCGGAGACAGCTTTTTGTAGACATGCAGAGAGAGCGCTGTGCTGAAAGTCATCATATTTACTATTCTGAGCACGGAGATTCTTTCAGCTGCTCCAATTTTGTGGACCTGGATTGGCTATCTTCTTCAGGAAACTCATGTGAAGAAGAACCATACGAGAGGTCATCAATTTCCAACTCCCCAGTTGCTGGCCTTTCTTCAGAAAATGTTGTCAATGGAGTGATAGTTGGAGAAACAAGTGCCTCCACTAGTGATTGGGCCAGCTCCAGCCTAAAGGGAAGGGAGCAAACTGAATCAGAGTTATCCTACAGTGGCGCACAGTCCAACAATCCAGAGGAATTTCCTGATACTTTTGTTCAATGGGTGTCTTATGGACAGACACTTTGCCATTGA 2547 0.4221 MASSENEISHSPSSSSSSSSSVSDEISPPSNLCMQKFRLYETRSNFYMIGRDKSRTYWRVLKIDRLDPSELNVREDSTTYTESECSDLLRRIHEGNKSTGGLKFVTTCYGIVGFIKFLGPYYMLLITKRRQIGAICGHAVYAISKTEMIPLPNSSVRSDIMNSKNENRYKKLLCTVDLTKDFFFSYSYHIMRSLQRNMCDNETGHVLYETMFVWNEFLTRGIRNHLQNTIWTVALVYGFFKQDTLVISGREFILTLIARRSRHYAGTRYLRRGVNEKGRVANDVETEQIVFEDAPEGLPIQISSVIQNRGSIPLFWSQETSRLNIKPDIILSKKDQNYQATRLHFENLVKRYGNPIIILNLIKTHEKRPRESILRQEFANAIDFINKDLSEENRLRFLHWDLHKHFQSKATNVLLLLGKVAAYALALTGFFYCQASSTLTPEDCLKWPPTDDAVKGSCSPTRHTDYDNEDANDLERKSSDEINVSDENNSAKPPRLQMGVLRTNCIDCLDRTNVAQYAYGLAALGNQLHSLGIIDHPKIDLDDPVANDLMRFYERMGDTLAHQYGGSAAHNKIFSARRGQWRAATQSQEFFRTLQRYYSNAWMDAEKQDAINVFLGHFQPQEGKPALWETSSDQHYDTGRLGDDDARSFFKRSFSDGNILRDSSTPMSAPNVKDEKFSKPGFPDRTGEGSKAFCESSPEISTTETESDISFSRYTPSMPRRQLFVDMQRERCAESHHIYYSEHGDSFSCSNFVDLDWLSSSGNSCEEEPYERSSISNSPVAGLSSENVVNGVIVGETSASTSDWASSSLKGREQTESELSYSGAQSNNPEEFPDTFVQWVSYGQTLCH 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00405 848 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC3-RELATED 20 848 - -
Car07g00405 848 MobiDBLite consensus disorder prediction 802 830 - -
Car07g00405 848 MobiDBLite consensus disorder prediction 462 483 - -
Car07g00405 848 MobiDBLite consensus disorder prediction 661 713 - -
Car07g00405 848 Pfam SacI homology domain 109 406 IPR002013 GO:0016791
Car07g00405 848 MobiDBLite consensus disorder prediction 1 28 - -
Car07g00405 848 MobiDBLite consensus disorder prediction 452 493 - -
Car07g00405 848 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 20 848 IPR043573 GO:0043813|GO:0046856
Car07g00405 848 MobiDBLite consensus disorder prediction 695 713 - -
Car07g00405 848 ProSiteProfiles Sac phosphatase domain profile. 173 566 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00405 Car-Chr7 3573030 3583526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00405 33 848 Acyl Lipid Metabolism Gene Families AT5G20840 62.090 0.0 1015
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00405 K22913 - gmx:100810079 1449.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00405 07 3573030 3583526 Car05g02881 05 73771667 73784370 ECH
Car07g00405 07 3573030 3583526 Car07g00405 07 3573030 3583526 ECH