Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00404 ATGGGAAGAGAAGCAGTGAAGCCGCAACAACAACAAGGTCAAGCAGCTGGTTACACAGTGGAGCAACTCGTTGCATTCAATCGTTACAATCCCGATATTCTTCCAGATCTCGAAAACTATGTCAATGATCAGGTTTCATCACAAACTTATAGCCTCGAATCAAATCTCTGCCTTCTTCGCCTCTACCAGTTTGAACCTGAGAAAACGAGTTCACAGATTGTAGCTCGCATATTGGTTAAGGCACTCATGGCTATGCCGGCTCCAGACTTCAGCTTGTGTCTCTTTTTGATTCCGGAACGTGTGCAAATGGAGGAGCAGTTCAAGACACTGATTGTTCTGTCTCACTATTTGGAGACTGGAAGATTTCGTCAGTTCTGGGATGAAGCAGCAAAAAGTCGTCACATAGTTGAAGCTGTGCCTGGATTTGAGCAGGCAATCCAAGGTTATGCAATTCATGTCCTATCCTTGACTTACCAAAAGATTCCTAGAACTGTTCTTGCTGAGGCAATCAACATAGAAGGTTTATCCCTGGACAAATTCCTTGAACACCAAGTAGCCAACTGTGGCTGGGTTATTGAGAAAAGCCAGACCAGGGGTCAACTCATTGTGCTTCCTAGAAATGAATTTAATGACCCAATTTTGAAGAAAAACACTGCAGACAGTGTACCATTGGAGCACGTTACTCGCATCTTCCCTATTCTTAGCTGA 708 0.4393 MGREAVKPQQQQGQAAGYTVEQLVAFNRYNPDILPDLENYVNDQVSSQTYSLESNLCLLRLYQFEPEKTSSQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQFWDEAAKSRHIVEAVPGFEQAIQGYAIHVLSLTYQKIPRTVLAEAINIEGLSLDKFLEHQVANCGWVIEKSQTRGQLIVLPRNEFNDPILKKNTADSVPLEHVTRIFPILS 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00404 235 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 11 235 IPR009374 GO:0003743|GO:0005737|GO:0005852
Car07g00404 235 SUPERFAMILY ARM repeat 14 137 IPR016024 -
Car07g00404 235 Gene3D - 131 234 IPR036388 -
Car07g00404 235 SUPERFAMILY "Winged helix" DNA-binding domain 140 232 IPR036390 -
Car07g00404 235 Pfam CSN8/PSMD8/EIF3K family 69 196 IPR033464 -
Car07g00404 235 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT K 15 234 - -
Car07g00404 235 Gene3D ARM repeat; domain 1 14 128 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Car07g00404 235 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 15 234 IPR009374 GO:0003743|GO:0005737|GO:0005852
Car07g00404 235 ProSiteProfiles PCI domain profile. 50 208 IPR000717 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00404 1 235 Eukaryotic Initiation Factors Gene Family AT4G33250 74.468 1.50e-128 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00404 K15028 - gmx:100306445 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00404 07 3568776 3571615 Car07g00404 07 3568776 3571615 ECH