Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00400 aTGGCAAAAGGTGGAAAATTAATGAAGCTAAAATCAGCACTCAAAAAATGGAACTCATTCGGAAACGGAAAACAGAGCCGCCACAGCATCAGCGCCGTCGCTGACGAAGACTCCTCCTCCAGATCGGACCTCCACACCGTCTACGTAGGAAAATCCCGCCGTCTATACAGAGTCACCTCCGACGTCGTTGATCATCCCGTTTTCCGCGAACTCGTCGAAAGGTCACGAGAAACAGAACAACAAAACGACGCCGTCAATGTCGTCGCATGTGAGGTTGTACTTTTCGAGCATTTGCTTTGGATGCTTGAAAATGCTGATCCTCAACCGGAATCACTCGATGAACTCGTCGATTTCTATGCTTGCTAG 366 0.4863 MAKGGKLMKLKSALKKWNSFGNGKQSRHSISAVADEDSSSRSDLHTVYVGKSRRLYRVTSDVVDHPVFRELVERSRETEQQNDAVNVVACEVVLFEHLLWMLENADPQPESLDELVDFYAC 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00400 121 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 121 IPR003676 GO:0009733
Car07g00400 121 Pfam Auxin responsive protein 15 102 IPR003676 GO:0009733
Car07g00400 121 PANTHER SMALL AUXIN-UP RNA-RELATED 4 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00400 Car-Chr7 3508926 3510115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00400 3 102 Calmodulin-binding Proteins AT4G34750 27.619 3.98e-06 41.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00400 - - gmx:100792286 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00400 07 3508926 3510115 Car07g00400 07 3508926 3510115 ECH