Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00399 ATGGACGAAGCTGGAGTCTCCAAATTAACTACAAAATTGAAGGAAATATTTCAAAAGTGGCAAACCATGACACTAAGTTCAAAAGAATGTGACAATCATTCTGATATGAATCATAATGGCATATCACCAATGATAAATAAAAGATTAAACAATTTAGTTTACTGTGATTCTGATGAAGATAGTTGCAACAATAGTCCAAAACCACCGCATgatgttcctaaagggtacttagctgtttatgttggaccagaacttcggagattcattattccaacaagttaccttagtcattctcttttcaaaatgttgttggaaaaagctgctgatgaatttggttttgatcagagtggtggactcacaattccttgTGAAATTGAGACTTTTAAATATCTTCTTAGTTGCATGGAGAATCATCATGACAATGACACCTCCTCTGGAAACACGGGAACTGTGGAAGAGTGA 462 0.2273 MDEAGVSKLTTKLKEIFQKWQTMTLSSKECDNHSDMNHNGISPMINKRLNNLVYCDSDEDSCNNSPKPPHDVPKGYLAVYVGPELRRFIIPTSYLSHSLFKMLLEKAADEFGFDQSGGLTIPCEIETFKYLLSCMENHHDNDTSSGNTGTVEE 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00399 153 PANTHER SMALL AUXIN-UP RNA-RELATED 5 151 - -
Car07g00399 153 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 151 IPR003676 GO:0009733
Car07g00399 153 Pfam Auxin responsive protein 62 134 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00399 Car-Chr7 3491734 3493539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00399 1 153 Calmodulin-binding Proteins AT3G43120 62.500 2.62e-66 197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00399 07 3491734 3493539 Car07g00399 07 3491734 3493539 ECH
Car07g00399 07 3491734 3493539 Car01g01298 01 17850214 17852494 PCT