Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00375 ATGAAAATCAATTGGAAATCGATATTTCCAAGTTGCTACAAGGATGAAAATGGTTACTCTTCACCGAAACCAGCAGCAACAAAAGTGGTTGCTACAAAGACAAATTCATTTAACAGAATATCTCTGACGGATCTGAGTTTTCCAAGCGCAACAACGCTTTCAGCAGAAGATCTTTCAATTTCTCTAGTAGGTTCTAATCTCTATGTTTTCACACTCGCTGAGCTCAAGATTATTACTCAGGGTTTCTCTTCAAGTAACTTTCTTGGTGAAGGAGGGTTTGGACCTGTGCATAAAGGTTTCATTGATGATAAAGTTAGACCTGGACTTGAACCTCAACCTGTTGCTGTTAAGCTCTTAGATTTGGATGGTTCTCAGGGTCATAAAGAATGGCTGACTGAGGTTGTGTTTTTGGGtcaactgagacatccacaccttgtgaagctgattggatattgttgtgaagaggaacataggcttctggtttatgagtatttaccaaGAGGAAGCTTAGAGAATCAACTATTTAGAAGATATTCAGCATCTTTACCATGGTCAACAAGAATGAAAATTGCTGTTGGAGCTGCAAAGGGTCTAGCCTTTTTACATGATGCAAAGAAACCAGTCATCTATAGAGATTTCAAAGCATCAAACATCTTATTAGACTCTGATTATAATGCAAAGCTCTCTGATTTTGGCTTGGCAAAAGATGGTCCGGAAGGAGATGACACACATGTTTCAACTAGAGTTATGGGCACTCAAGGTTATGCTGCCCCTGAATATATCATGACAGGACATTTGACAGCAATGAGTGATGTGTATAGTTTTGGAGTTGTTTTATTGGAGATATTAACTGGGAGAAGATCTGTGGATAAGGTACGTCCGCCAAGAGAACAGAATCTAGTAGAATGGGCTAGACCAGTGTTAAACGATCCACGAAAACTTAGTAGAATAATGGATCCAAGGCTTGAAGGACAGTATTCAGAGATGGGGGCAAGAAAAGCAGCTGCATTagcctatcaatgcttaagtcacaggccaaggaatagacctacAATGTCTAATGTGGTTAACACTCTTGAGCCTCTACAAGATTTTGATGATATTCCAATTGGACCCTTTGTTTACACGGTTCCAAATGATGTTAACAATGAAGTTCAAAAAGAGTGTGTTATTGAGACACCAAAAGAGAGAAGAAGGGAAAGTAGTGGGAGTAGTAGTACTACACATCATCGACGAAATCAACATGTCAACAATAATGGTCATAAGCATCTTGTTATTGATAATAACAATAATAATGTGGTACAAAATAAAGATGGAGAAGAATATTATGACACGCCTAAGGAGAAGAAAAGGGAAAATAATCACCATCATAGAAGTCATCATCATCGACACAGTGGGCATAAGCATCCACTTAAATCACCAAAGTCAAAATCACCGAATAATGAGGGACACCAAAGTGGGTCACACTCACCAGACACCTCTATTGCATCAGAAAGCCAAGGAAATtaa 1509 0.3545 MKINWKSIFPSCYKDENGYSSPKPAATKVVATKTNSFNRISLTDLSFPSATTLSAEDLSISLVGSNLYVFTLAELKIITQGFSSSNFLGEGGFGPVHKGFIDDKVRPGLEPQPVAVKLLDLDGSQGHKEWLTEVVFLGQLRHPHLVKLIGYCCEEEHRLLVYEYLPRGSLENQLFRRYSASLPWSTRMKIAVGAAKGLAFLHDAKKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYIMTGHLTAMSDVYSFGVVLLEILTGRRSVDKVRPPREQNLVEWARPVLNDPRKLSRIMDPRLEGQYSEMGARKAAALAYQCLSHRPRNRPTMSNVVNTLEPLQDFDDIPIGPFVYTVPNDVNNEVQKECVIETPKERRRESSGSSSTTHHRRNQHVNNNGHKHLVIDNNNNNVVQNKDGEEYYDTPKEKKRENNHHHRSHHHRHSGHKHPLKSPKSKSPNNEGHQSGSHSPDTSIASESQGN 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00375 502 Gene3D Phosphorylase Kinase; domain 1 46 164 - -
Car07g00375 502 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 24 406 - -
Car07g00375 502 MobiDBLite consensus disorder prediction 407 438 - -
Car07g00375 502 MobiDBLite consensus disorder prediction 389 502 - -
Car07g00375 502 MobiDBLite consensus disorder prediction 452 474 - -
Car07g00375 502 PANTHER OS01G0588500 PROTEIN-RELATED 24 406 - -
Car07g00375 502 SUPERFAMILY Protein kinase-like (PK-like) 60 360 IPR011009 -
Car07g00375 502 ProSiteProfiles Protein kinase domain profile. 82 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00375 502 MobiDBLite consensus disorder prediction 476 502 - -
Car07g00375 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Car07g00375 502 Pfam Protein tyrosine and serine/threonine kinase 86 359 IPR001245 GO:0004672|GO:0006468
Car07g00375 502 Gene3D Transferase(Phosphotransferase) domain 1 165 368 - -
Car07g00375 502 CDD STKc_IRAK 88 362 - -
Car07g00375 502 MobiDBLite consensus disorder prediction 389 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00375 Car-Chr7 3292554 3294629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00375 70 411 Glycoside Hydrolase AT3G07070 49.714 6.71e-104 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Car07g00375 PK_Tyr_Ser-Thr 9.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00375 - - mtr:MTR_4g125260 828.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00375 07 3292554 3294629 Car07g03021 07 57042093 57044862 ECH
Car07g00375 07 3292554 3294629 Car01g01253 01 15594614 15599018 ECH
Car07g00375 07 3292554 3294629 Car05g02877 05 73726537 73728904 ECH
Car07g00375 07 3292554 3294629 Car04g03263 04 61073437 61076764 ECH
Car07g00375 07 3292554 3294629 Car07g00375 07 3292554 3294629 ECH
Car07g00375 07 3292554 3294629 Car01g01253 01 15594614 15599018 PCT