Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00365 ATGATGAATGGAAGAAATAGGTACCCTTTTACTCCTTCTCAATGGCAAGAGCTTGAACATCAAGCTCTTGTTTACAAATACATGGCTTCAGGTATTTCCATTCCACCTGATCTTCTTTTCACCATCAAAAGAAGCTTCTTAGACTCTCCTCTTTCTTCAAGGATGTTACCTCACCAATCTCAGCACTTTGGGTGGAACTATTTGCCAATGGGATTGGGAAGAAAAATAGACCCAGAGCCAGGGAGGTGTAGAAGAACAGATGGAAAGAAATGGAGGTGTTCAAAAGAAGCATATCCAGATTCAAAATACTGTGAGAGACACATGCATAGAGACAACAACAGTGCTCCCTTGTTTCTTGACTCTTCTTCCTCTCACAGTaacaacaacaacaacaacaCTGATTGCAGGAACAGGTATGTTTATGGACTGAAAGAGGAAGTGGATGAACATGCTTTCTTCACTGAACCTTCTGGAACTATGAGAAGTTTATCAGCTTCTTCTATGGATGATTCATGGCAACTAACACCACTTACTATAAGTTCCTCTTCCTCTTCTAAACAGAGGAGTTGCTCTGGTTTATCCAACGAGAATGAGTATTCTTACTTGCAACTTCAAAGCCTAAGTGacaacaacaacaacaactcaaaacaaccacaccaagatcaaAGTTGTTACATCTCAGGAAGTGATGGGAAAGAAGAACCTCAGAAGATTTTTCATCGCTTCTTTGATGAATGGCCACCGAAAAGCAGAAACTCTTGGCTTGATTTGGATGATAAATCATCCACCACTCAGCTTTCAATTTCCATTCCAACATCCTCTCATGATTTCACAACTTTTAGTTCCACAAATCAACGAGGTAATGAATTCTCTTCACTGCATAGCTTTTCGATCTATTCTTCTTTGATTTTCTTTACTATCATGGATTTCTCTTTAACTTATTATATTTTTGTTTTGCAGATGGTTGAGGTTGGATTTGAATAA 984 0.3648 MMNGRNRYPFTPSQWQELEHQALVYKYMASGISIPPDLLFTIKRSFLDSPLSSRMLPHQSQHFGWNYLPMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRDNNSAPLFLDSSSSHSNNNNNNTDCRNRYVYGLKEEVDEHAFFTEPSGTMRSLSASSMDDSWQLTPLTISSSSSSKQRSCSGLSNENEYSYLQLQSLSDNNNNNSKQPHQDQSCYISGSDGKEEPQKIFHRFFDEWPPKSRNSWLDLDDKSSTTQLSISIPTSSHDFTTFSSTNQRGNEFSSLHSFSIYSSLIFFTIMDFSLTYYIFVLQMVEVGFE 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00365 327 ProSiteProfiles QLQ domain profile. 9 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Car07g00365 327 ProSiteProfiles WRC domain profile. 77 126 IPR014977 -
Car07g00365 327 MobiDBLite consensus disorder prediction 115 134 - -
Car07g00365 327 PANTHER GROWTH-REGULATING FACTOR 6 2 275 - -
Car07g00365 327 MobiDBLite consensus disorder prediction 207 229 - -
Car07g00365 327 SMART QLQ_2 8 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Car07g00365 327 PANTHER - 2 275 IPR031137 GO:0005634|GO:0006351|GO:0032502
Car07g00365 327 MobiDBLite consensus disorder prediction 207 232 - -
Car07g00365 327 Pfam QLQ 9 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Car07g00365 327 Pfam WRC 78 113 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00365 Car-Chr7 3222955 3225001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00365 7 120 GRF Transcription Factor Family AT3G13960 70.175 1.81e-53 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Car07g00365 WRC 2.9e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00365 - - cit:102612529 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00365 07 3222955 3225001 Car07g00365 07 3222955 3225001 ECH
Car07g00365 07 3222955 3225001 Car01g01241 01 15351425 15353538 PCT