Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00363 ATGGGAAGAAGCCCTTGTTGTTCAAAAGAGGGTTTGAATAGAGGTGCTTGGACTGCTCATGAAGACAAAATCCTCACTGAATACATTACTCTTCATGGTGAAGGAAAATGGAGAAACCTTCCCAAAAGAGCAGGTTTGAGAAGATGTGGAAAAAGTTGTAGACTTAGATGGTTGAATTATCTCAGACCTGATATTAAGAGAGGCAATATATCCTCAGATGAAGAAGAGCTTATCATTAGGCTTCACAAACTATTAGGAAACAGATGGTCTCTAATAGCAGGAAGACTCCCAGGGCGAACAGACAATGAAATAAAGAATTATTGGAACACAAATTTAGGAAAAAAAGTTAAAGATATCCATAAACAACACACCAACATGACTTCTTCTTCTACAAGCCACTCTGCTGCACCAAATCCTAAGATCACACAAAAACACAAGAATCTTAAGCAACAAAATTTTCCCTCATTATTACCATCTCCTCCTAAGCCAAATTCACATGTTGTCCGTACAAAAGCTACCAAGTGCTCTAAGGTAGTATTCAAGAACTCACTCCCTCAATCATCAACAATGCAAATGCAGAACAATTCTGAGGCAGAGGCAGAAACAGAGCCGTCGACACGTGTCGATGCTGCTAATGAGTTTTTATCATTTTCTGGTGAAGAAAAAGAAGTTTCTGAAGATTTGCTAGTTGATTTTAACATGGGGAATGATAATGGCTTATCTGAATTTCTTAACTCAGATTTATCAAATATGTGCAATTTTAGTTACAATGAGTTGTTGTTATCACCTTGTTCGGACCAACCTCCTATGTTATCTGATGAAATTCTCAAGAACTGGACACAATGCTGCTTTAATGATGAAACAAATGTGTCCAACAACTTTCACTCTTTCAATTCCTTTCTTGATTCGAGTGAGGAAGTACTAGGAGAATGA 933 0.3751 MGRSPCCSKEGLNRGAWTAHEDKILTEYITLHGEGKWRNLPKRAGLRRCGKSCRLRWLNYLRPDIKRGNISSDEEELIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNLGKKVKDIHKQHTNMTSSSTSHSAAPNPKITQKHKNLKQQNFPSLLPSPPKPNSHVVRTKATKCSKVVFKNSLPQSSTMQMQNNSEAEAETEPSTRVDAANEFLSFSGEEKEVSEDLLVDFNMGNDNGLSEFLNSDLSNMCNFSYNELLLSPCSDQPPMLSDEILKNWTQCCFNDETNVSNNFHSFNSFLDSSEEVLGE 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00363 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Car07g00363 310 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 259 - -
Car07g00363 310 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Car07g00363 310 CDD SANT 16 61 IPR001005 -
Car07g00363 310 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Car07g00363 310 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Car07g00363 310 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Car07g00363 310 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Car07g00363 310 PANTHER TRANSCRIPTION FACTOR TT2 1 259 - -
Car07g00363 310 MobiDBLite consensus disorder prediction 184 206 - -
Car07g00363 310 MobiDBLite consensus disorder prediction 184 201 - -
Car07g00363 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Car07g00363 310 Gene3D - 70 152 - -
Car07g00363 310 CDD SANT 71 112 IPR001005 -
Car07g00363 310 SMART sant 66 114 IPR001005 -
Car07g00363 310 SMART sant 13 63 IPR001005 -
Car07g00363 310 Gene3D - 14 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00363 Car-Chr7 3211889 3213435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00363 1 116 MYB Transcription Factor Family AT5G49330 74.138 2.63e-61 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car07g00363 Myb_DNA-binding 3.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00363 K09422 - gmx:100802704 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00363 07 3211889 3213435 Car07g03038 07 57243232 57244890 ECH
Car07g00363 07 3211889 3213435 Car07g00363 07 3211889 3213435 ECH