Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00350 ATGGTTTGGTTTCAATGCGAAGATTGCGGTGACAATCTCAAAAAACCCAAGTTGCCCAATCACTTCCGAACTTGCTCCGCCAACAAGCTTTCGTGCATTGACTGTGGCCAAATGTTTGGTCGAGACACCGTTCAGAATCACACTCAATGTATTACCGAAGCGGAAAAGTATGGTCCAAAAGGCCAAGGCAAAACTTTGAATGCTGCAGCTGCCAAGCCTGTCAAAGATGGGAAGCAAAGGCCAGAAGTTGATATTAATGTGGGTTTATCTGAACGGCCTCCTTGGTTCTGTAGTCTCTGCAATACAAAAGCTACAAGTAAGCAAGCGCTTCTTCTCCATGCTGATGGAAAGAAACACAGGGCAAAAGCCCGAGCATTCCATGCTTCGCAGCAACAACCAGTTCAGACCAATAATTCTGCCCCTGATGCAAAGAGTGCAGTGGAGATCGCTTCTAATGGTACGACAAGCAATGACAAAAATGTGGAGCTTCCGAAATCGCAAGAGTCTTCTGAACAAAATAATTTGAAACCAGGGAACGAAGATTCATCAGAGAATAAAAAGAGGAAAGTTGAAGCATTAGAGGGTGACCTTATTAAAAAATGCAAGAATAGTACTTCTGTTAACGCGGAAAATGGGGAAGTAATTCAGGGAGAGAAGGCAGGAGAGAAGAAGTTGAAGAAAGAAGAGATAGTAGCACCTCACTGTACAAGTGCTGTCAACAGCAAAATAAAATGGAAGAAGTTTATCAAAACAGCCTTGAAATCTCACCCTGATGGAATTTTGAAAATGAAGAAACTGAGAAAAGTTgtcttcaaagctctgcaagaatctggtattgtagtaaatgaaaatgaattaagTGAGGCACTTGAGCAGCAGATCAATTCCAGCTCCAAATTTGCAGTTGAGAACAAGTATGTGCGATTAGTGACCAAAGATTGA 942 0.4013 MVWFQCEDCGDNLKKPKLPNHFRTCSANKLSCIDCGQMFGRDTVQNHTQCITEAEKYGPKGQGKTLNAAAAKPVKDGKQRPEVDINVGLSERPPWFCSLCNTKATSKQALLLHADGKKHRAKARAFHASQQQPVQTNNSAPDAKSAVEIASNGTTSNDKNVELPKSQESSEQNNLKPGNEDSSENKKRKVEALEGDLIKKCKNSTSVNAENGEVIQGEKAGEKKLKKEEIVAPHCTSAVNSKIKWKKFIKTALKSHPDGILKMKKLRKVVFKALQESGIVVNENELSEALEQQINSSSKFAVENKYVRLVTKD 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00350 313 Pfam Zinc-finger of C2H2 type 95 119 - -
Car07g00350 313 Gene3D - 1 50 - -
Car07g00350 313 SUPERFAMILY beta-beta-alpha zinc fingers 1 26 IPR036236 -
Car07g00350 313 MobiDBLite consensus disorder prediction 128 179 - -
Car07g00350 313 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 1 26 - -
Car07g00350 313 SUPERFAMILY beta-beta-alpha zinc fingers 30 58 IPR036236 -
Car07g00350 313 Gene3D Classic Zinc Finger 89 131 - -
Car07g00350 313 SMART ZnF_U1_5 92 126 IPR003604 GO:0003676|GO:0008270
Car07g00350 313 MobiDBLite consensus disorder prediction 121 188 - -
Car07g00350 313 PANTHER CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR 1 310 IPR039999 GO:0003677
Car07g00350 313 SUPERFAMILY beta-beta-alpha zinc fingers 80 127 IPR036236 -
Car07g00350 313 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 27 51 - -
Car07g00350 313 Pfam LYAR-type C2HC zinc finger 30 57 IPR014898 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00350 1 212 C2H2 Transcription Factor Family AT2G19380 36.071 6.90e-42 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00350 K15263 - gmx:100790272 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00350 07 3116235 3119217 Car07g00350 07 3116235 3119217 ECH