Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00348 ATGACCAAAGGAAACTTGGGCCTCGGTCTCAAACTCTCTGTTCCTGCAACTGATCAAGCTGCTTTTGCCAAGTTTCTGACTGAAAGTGGAACGTTTAAGGATGGAGATCTGCTTGTTAACAGAGATGGAGTTCGAATTGTCTCTCAAAGTGAAGTTGAAGCTCCACCCCCAATCAAGGCAACAGACGACCAGTTAAGTTTGGCGGACATAGACGCAGTGAAAGTCGTTGGGAAGGGAAATGGAGGGGTGGTGCAATTGGTGCAACACAAATGGACTAATCAGTTTTTCGCATTAAAGGTAATTCAAATGAATATTGAAGAGTCCGTGCGCAAGCAGATAGCTAAAGAGCTGAAAATTAATCAAGCAGCACAATGTCCCTATGTTGTTGTCTGCTACCAATCATTCTATGACAATGGTGTCATATCAATCATCTTAGAGTACATGGATGGAGGTTCCTTGGCTGATCTTCTGAAGAAAGTTAAAACAATTCCGGAACGTTATCTTTCTGCCATCTGCAAGCAGGTGCTGATGGGTTTAATATATCTTCACCACGAAAGATATATTATCCACAGAGACTTGAAACCTTCTAATCTGTTGATTAATCATATAGGCGAAGTAAAGATTACTGATTTTGGTGTTAGTGCAATTATGGAAAGTACATCTGGTCAAGCAAATACTTTCATTGGCACATGCAACTATATGTCTCCGGAGAGAATCAACGGAAGCCAACATGGCTACAACTACAAAAGTGATATATGGAGTTTGGGACTAATATTGCTTGAGTGTGCTATGGGGCGGTTTCCATATACACCACCTGATCAAAGTGAAAAATGGGAAAGTATATTTGACCTTATTGAAACTATTGTCGACAAACCTCCTCCTACTGCTCCATCTGAACAATTCTCTACAGAATTTTGCTCATTTATCTCTGCATGGTAA 939 0.4068 MTKGNLGLGLKLSVPATDQAAFAKFLTESGTFKDGDLLVNRDGVRIVSQSEVEAPPPIKATDDQLSLADIDAVKVVGKGNGGVVQLVQHKWTNQFFALKVIQMNIEESVRKQIAKELKINQAAQCPYVVVCYQSFYDNGVISIILEYMDGGSLADLLKKVKTIPERYLSAICKQVLMGLIYLHHERYIIHRDLKPSNLLINHIGEVKITDFGVSAIMESTSGQANTFIGTCNYMSPERINGSQHGYNYKSDIWSLGLILLECAMGRFPYTPPDQSEKWESIFDLIETIVDKPPPTAPSEQFSTEFCSFISAW 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00348 312 Coils Coil 311 312 - -
Car07g00348 312 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Car07g00348 312 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Car07g00348 312 PANTHER MAP KINASE KINASE 1 311 - -
Car07g00348 312 SMART serkin_6 70 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00348 312 Gene3D Phosphorylase Kinase; domain 1 45 149 - -
Car07g00348 312 Gene3D Transferase(Phosphotransferase) domain 1 150 312 - -
Car07g00348 312 SUPERFAMILY Protein kinase-like (PK-like) 67 310 IPR011009 -
Car07g00348 312 Pfam Protein kinase domain 73 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00348 312 ProSiteProfiles Protein kinase domain profile. 70 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00348 312 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1 311 - -
Car07g00348 312 CDD PKc_MAPKK_plant_like 85 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00348 Car-Chr7 3097601 3102897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00348 1 311 MAP Kinase Kinase Gene Family AT4G29810 67.188 5.95e-160 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Car07g00348 Pkinase 1.8e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00348 K20603 - gmx:100789734 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00348 07 3097601 3102897 Car07g00348 07 3097601 3102897 ECH
Car07g00348 07 3097601 3102897 Car01g01220 01 14993063 14998032 PCT