Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00347 ATGGAGGAAATATCTTCAAGTGTTGCAGTGCCATTTACACTTGGAAATTTGATTCAAAAGGAAGCTGCAGTTACAACTCACATGGAGATAACTGGTCTAAAGCTTATGGCAAACACCGCAGCGGCTTTGATATTAAATCCTGCTGTGGAGGGTTGTCAATCATTTTCTGTTGGAAATGAAAACCATACAGATGTTAGTCTGCAACATCAAATCACGGTATCTGCAGAGGTAAAGGAGAATCAGGTTGGATCTTCTGTTGTCTCGGAAATGGTGATTGAATGTGAGAGTAATTGGATCTTGAGCGAAAATCAAGCTATAAAGGAAGATGAAATCATGTTAGCAGTGGATTTTCAGTGTCTGCATAATTCAGGCTCTCAATCTGTGGCTGATGACAAAGGCGGTCCTTGTAGAATGGAAGCTACGTCGTTTAAGACTATATATTCTGAAATAGGTTCACCGATAATTGTCACTGTTGATGATGACATTAGTGGTAAGTTTAGTATAAACGAGCCACTTTCAGCACGAAAGCCGGTGCAGAACACAGTTTCTATTGCAATAGATCTTGAGAGTGAAAATCGAAGACGATCGGAAGCGGAGGTTGATCCAAAACTATCTGCTATGCTTTTTGATCAGTTTCCAAAGGAGAACAAAACATGGAGAACAAACAACCAGAATGGTTTGGAGTTGAGTAGTGGCCCTCTCTTTGGTTTCTCATCAATCTGTGGAAATAGACAGGAGATGGAAGATGCTGTTTCTGTTATACCTCAACTTTTCCAAGTCCCTTCACAGATGCTAATGGATGACCATGTGAATGAAAACACAAAACTAGCACATTTTTTTGGTGTCTATGATGGACATGGGGGCTTTCAGGTTGCTAGTTACTGCCGGGAACGTCTTCATTCAGTGTTGATTGAGGAGATCAAAACACAACAGTTGAATATGGTAACAAATGAGAGAAACGATTGGCAGAAGGATTGGAAGACAGCATTGTCCAAGTGTTTTCAGAAAGTAGATGATGAGGTTGGAGGAAATGGTGCAGGTAACAGTGAAACAAAAAGTGGTGGCTCTGAGTCTAATATTGAACCTCTTGCTCCTGAGACAGCTGGTTCCACTGCAGTGGTTGCCATTTTAAGTCAAACTCACATAGTAGTTGCAAATTGTGGAGATTCAAGAGCCGTCTTGTATCGCGGGAAAGAAGCCATGGCATTGTCTTCTGATCACAAACCAAATCGCGAGGACGAGAGAGCAAGAATAGAAGCTGCAGGAGGAAGAGTCATAAGTTGGAAAGGATACCGAGTTCTCGGTGTCCTGGCCATGTCAAGGTCCATAGGTGATAGATACTTGAAACCATGGATAATTCCAGAACCAGAAGTTAATATTGTGCAAAGAGAGAGAAGCGATGAGTGCCTTATTTTAGCAAGTGATGGTTTGTGGGATGTAATGACCAACGAAGAAGCATGCGATGTCGCAAGGAAGCGAATTCTTATTTGGCACAAGAAGTATGGAAACAACGGAACAACAGGACATGACAAAGGAGAAGGAGGAGTTGATCTTGCATCTCAGTCGGCCGCAGAGTATCTATCAAAACTCGCCCTCCACAGAGGAAGCGGCGATAACATCTCTGTAATTGTGATAGACCTAAAGGCTCAGAGAAAATTGAAGAGAAAGACATAA 1674 0.4205 MEEISSSVAVPFTLGNLIQKEAAVTTHMEITGLKLMANTAAALILNPAVEGCQSFSVGNENHTDVSLQHQITVSAEVKENQVGSSVVSEMVIECESNWILSENQAIKEDEIMLAVDFQCLHNSGSQSVADDKGGPCRMEATSFKTIYSEIGSPIIVTVDDDISGKFSINEPLSARKPVQNTVSIAIDLESENRRRSEAEVDPKLSAMLFDQFPKENKTWRTNNQNGLELSSGPLFGFSSICGNRQEMEDAVSVIPQLFQVPSQMLMDDHVNENTKLAHFFGVYDGHGGFQVASYCRERLHSVLIEEIKTQQLNMVTNERNDWQKDWKTALSKCFQKVDDEVGGNGAGNSETKSGGSESNIEPLAPETAGSTAVVAILSQTHIVVANCGDSRAVLYRGKEAMALSSDHKPNREDERARIEAAGGRVISWKGYRVLGVLAMSRSIGDRYLKPWIIPEPEVNIVQRERSDECLILASDGLWDVMTNEEACDVARKRILIWHKKYGNNGTTGHDKGEGGVDLASQSAAEYLSKLALHRGSGDNISVIVIDLKAQRKLKRKT 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00347 557 SMART PP2C_4 224 545 IPR001932 -
Car07g00347 557 MobiDBLite consensus disorder prediction 341 363 - -
Car07g00347 557 ProSiteProfiles PPM-type phosphatase domain profile. 234 547 IPR001932 -
Car07g00347 557 MobiDBLite consensus disorder prediction 346 363 - -
Car07g00347 557 Pfam Protein phosphatase 2C 235 540 IPR001932 -
Car07g00347 557 Gene3D - 223 557 IPR036457 -
Car07g00347 557 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 102 557 - -
Car07g00347 557 SUPERFAMILY PP2C-like 233 548 IPR036457 -
Car07g00347 557 ProSitePatterns PPM-type phosphatase domain signature. 279 287 IPR000222 GO:0043169
Car07g00347 557 PANTHER ALPHABET, ISOFORM E-RELATED 102 557 - -
Car07g00347 557 CDD PP2Cc 235 547 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00347 Car-Chr7 3094926 3097314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00347 220 556 PP2C-type Phosphatase Gene Family AT4G26080 57.353 5.07e-131 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00347 K14497 - gmx:100789207 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00347 07 3094926 3097314 Car07g00347 07 3094926 3097314 ECH
Car07g00347 07 3094926 3097314 Car01g01219 01 14989072 14992852 PCT