Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00337 ATGTTGGGTGACGCCACTAACTGGGACGAAAATGCATACAAAGAAACCGTATTGAAGGAAATAGAGATTCAAACTCAAACCGTTTTCAGAACAGCTTGGTCTCCATCTCAATCTTCTCAAACCCCTAACCTCAACTCTCTCATCGTTGCTTCAAGTGACGGTTCTATCGCCTCTTACTCCATCCCCGCTTCAATTTCCGCTTCTAAGCTTAAAAATCCATTTGGTTTTACCGATACGGATAATTTTGTGGCTGAGCCAGATTGCTTCTTTCAAGCGCATAATGGGGCTGCATATGATGTCAAATTCTATGGCTATGACGATGAAAATGCCCTGTTGTTGAGTTGCGGTGATGATGGCCGAATTCGAGGATGGAGATGGAAGGAACTTACAAGCTCAAAGCATTATATTTGTTCAGAAGGAAATGATATCAAGCCTATCCTTGATGTGGCAAATCCTCAACACAAAGGTCCTTGGGGTGCACTTTCACCTATCCCTGAGAATAATGCTATTGCTGTTAATACTCAGGCAGGGTCTGTTTTCGCTGCTTCTGGTGATTCTTGTGCATATTGTTGGGATGTGGAATCTGGTAAATTAAAAATGGTATTCAAGGGTCACTCTGATTACTTGCATTGTATTGTTGCTCGCAACTCGTCCAATCAGATCATAACAGGTTCAGAGGACGGGACAGCTCGAATTTGGGATTGCAAAAGTGGAAAGTGTATCCAAGTTATTGATCCAGCAAAAAATTTGAAGTTAAAAGGACCTGTTTCATGGGTCGGCTCTGTTGCTTTAGATGCAAGTGAGAGCTGGTTGGCTTGCAGTAGTGGACATAATATATCACTTTGGAACCTTCCTGCTTCAGAGTGTATTTTAAATTTTTCCACTCGAGCTTCTGTACAGGACATGTTATTTGACAATAATCAGATTCTGACTGTTGGTGCAGATCCTATACTAAATCGCTTTGACATGAACGGTGCAATCCTTTCACAAATACCGTGTGCTCCTCCATCAGCTTTTTCTATCTCCTTACATCCAGCTGGGGTTATTGCCGTTGGTGGTTACGGGTGTCTTGTGGATGTTATCTCCCAATTTGGCAGCCACATGTGCACCTTTCGTTGCCAATGTATTTAG 1131 0.4253 MLGDATNWDENAYKETVLKEIEIQTQTVFRTAWSPSQSSQTPNLNSLIVASSDGSIASYSIPASISASKLKNPFGFTDTDNFVAEPDCFFQAHNGAAYDVKFYGYDDENALLLSCGDDGRIRGWRWKELTSSKHYICSEGNDIKPILDVANPQHKGPWGALSPIPENNAIAVNTQAGSVFAASGDSCAYCWDVESGKLKMVFKGHSDYLHCIVARNSSNQIITGSEDGTARIWDCKSGKCIQVIDPAKNLKLKGPVSWVGSVALDASESWLACSSGHNISLWNLPASECILNFSTRASVQDMLFDNNQILTVGADPILNRFDMNGAILSQIPCAPPSAFSISLHPAGVIAVGGYGCLVDVISQFGSHMCTFRCQCI 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00337 376 Pfam WD domain, G-beta repeat 197 234 IPR001680 GO:0005515
Car07g00337 376 Pfam WD domain, G-beta repeat 251 283 IPR001680 GO:0005515
Car07g00337 376 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 202 234 - -
Car07g00337 376 Gene3D - 148 374 IPR015943 GO:0005515
Car07g00337 376 SUPERFAMILY WD40 repeat-like 41 362 IPR036322 GO:0005515
Car07g00337 376 SMART WD40_4 14 60 IPR001680 GO:0005515
Car07g00337 376 SMART WD40_4 286 322 IPR001680 GO:0005515
Car07g00337 376 SMART WD40_4 83 125 IPR001680 GO:0005515
Car07g00337 376 SMART WD40_4 157 192 IPR001680 GO:0005515
Car07g00337 376 SMART WD40_4 195 234 IPR001680 GO:0005515
Car07g00337 376 SMART WD40_4 237 283 IPR001680 GO:0005515
Car07g00337 376 Gene3D - 5 147 IPR015943 GO:0005515
Car07g00337 376 ProSiteProfiles Trp-Asp (WD) repeats profile. 202 243 IPR001680 GO:0005515
Car07g00337 376 PANTHER THO COMPLEX SUBUNIT 6 HOMOLOG 9 373 IPR042626 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00337 123 239 Eukaryotic Initiation Factors Gene Family AT2G46290 29.060 1.65e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00337 K13175 K03257 gmx:100820024 632.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00337 07 3030088 3037045 Car07g00337 07 3030088 3037045 ECH