Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00333 ATGGAACCTCGTGTTGGAAATAAGTTTCGCCTCGGTAGGAAGATCGGTAGCGGTTCCTTTGGAGAGATCTACTTAGGTACTAATATTCAAACTAATGAAGAGGTTGCAATTAAGCTTGAAAATGTCAAGACTAAGCATCCTCAGTTGCTGTACGAGTCCAAGTTGTACAGAATTCTCCAGGGAGGAACTGGAATTCCAAATGTTAGATGGTTTGGAGTGGAGGGAGATTACAATGTTTTAGTGATGGATCTGCTGGGACCTAGTCTTGAAGATCTCTTTAACTTTTGTAGTAGAAAGTTATCACTAAAGACAGTTCTTATGCTTGCTGATCAAATGATCAACCGTGTTGAGTTCATTCATTCGAAATCATTTCTACATCGAGATATCAAACCAGATAATTTTCTAATGGGATTAGGAAGGCGTGCGAACCAGGTTTATGCTATTGATTTCGGTCTGGCTAAGAAATACAGAGATAGTTCAACCCATCAACACATTCCTTACAGAGAAAATAAAAATTTGACTGGAACTGCAAGATATGCTAGCATGAATACTCATCTTGGCATTGAACAAAGTCGAAGAGATGATTTGGAATCTCTTGGTTATGTTTTGATGTATTTCCTGAGAGGAAGTCTTCCTTGGCAGGGACTTAAAGCAGGAACCAAGAAACAGAAGTATGAGAGAATCAGTGAAAAAAAGGTTTCTACATCCATTGAAGCCTTATGTCGGGGTTATCCTACAGAATTTGCATCATACTTCCATTACTGCCGCTCATTAAGGTTTGATGATAAGCCAGATTATGCTTATCTCAAAAGAATATTTCGCGATCTGTTTATTCGTGAAGGTTTGAAATTATTATCATACCGAAAGGATTTCTTTTTCCTTACTTCTCAAGTTTGTCTACTGTATGCTTTCTCTTATATTTTGCATTTGAGTCTATGTAAGATCATTGTTTAA 954 0.3742 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFIHSKSFLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYERISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGLKLLSYRKDFFFLTSQVCLLYAFSYILHLSLCKIIV 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00333 317 CDD STKc_CK1_delta_epsilon 8 281 - -
Car07g00333 317 Gene3D Transferase(Phosphotransferase) domain 1 1 293 - -
Car07g00333 317 SMART serkin_6 9 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00333 317 PANTHER CASEIN KINASE-RELATED 1 293 - -
Car07g00333 317 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00333 317 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Car07g00333 317 Pfam Protein kinase domain 10 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00333 317 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Car07g00333 317 PANTHER CASEIN KINASE 1-LIKE PROTEIN 2 1 293 IPR030509 GO:0004672|GO:0005524
Car07g00333 317 SUPERFAMILY Protein kinase-like (PK-like) 5 282 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00333 Car-Chr7 3000830 3007711 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00333 7 223 EF-hand Containing Proteins AT2G17890 26.667 3.89e-13 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Car07g00333 Pkinase 4.5e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00333 K02218 - gmx:100811567 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00333 07 3000830 3007711 Car07g00333 07 3000830 3007711 ECH
Car07g00333 07 3000830 3007711 Car01g01205 01 14785748 14790222 PCT