Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00322 ATGGCCCCTAGAATCCTACTCTGCGGCGACGTGTTTGGTCGCTTCAACCAGCTCTTCAAGCGCGTCTCATCGGTTAACAAATCGGCGGGTCCATTCGACGCGCTTTTGTGCGTGGGCCAATTCTTCCCCGACTCACCGGAGCAACTTGACGACTTTATGGCATACATCGAAGGTGGCTCCCACATTCCCCTCCCAACTTACTTCATTGGCGATTATGGCGTCGCTGCCCCTAAAGTTTTGTTGGCGGCTTCTAAGGATTCTGCTAACCGCGGTTTCAAGATGGATGGCTTGAAGGTTTGCGATAATTTGTATTGGTTGAAAGGCAGTGGCAAATTCAACCTCTTCGGGTTATCTGTCACCTATTTATCTGGTAGGAAATCGTCGACTGTTCAGCAGTTTGGAACTTACAGTCAAGACGATGTCGATGCTTTGCGTGCAATAGCCGAAGAACCTGGAGTTGTTGATTTGTTCTTGACATATCCTTATTCTACAGGCAGCGATTCAACCATATCAGATTTAGTACAAGAGATTAAACCACGCTATCATATTGCAGGTTCTAAAGGTATTTACTATGCCCGCGAACCATATTCCAATGTTGATGCCGTGCACGTTACCCGCTTCATAGGGCTTGCGTCTGTTGGAAATAGAGATAAGCAGAAATTTATTCATGCAATTTCTCCAACACCTGCATCCACCATGTCTTCCACTGAGATTGCCATGAAAACCACAAATACCACCTTATCACCATACACATCTGCGGAGAAAAAAGCCTCTCCAAATGATACTGTAAAGAGATCCAGTGATGGTATCTCTGATTCTCAACATTGGAGATATGACGTTTCACAAAAGCGACAGAAACATGAAGCTGGCGATAAAATGTGTTTCAAATTTGTATCTTCTGGCTCTTGTCCGCGAGGAGAGCAATGCAATTATCGACACGACACAGATGCAAGGGAGCACTGCATGAGAGGTGTTTGTTTTGATTTTTTGAACAAGGGAAAATGTGAAAGGGGTCCAGATTGCAGCTTTAGGCACAGCTTGCAGGATGAAGGTGATAGGGATCCTTCCAGGAAGCGTGGATCCGAAAACACTAGGCCTAGCAGAGAATGTTGGTTCTGCTTGTCAAGTTCCAATGTGGAGTCCCATTTAATCATAAGTATTGGGGAAAATTACTATTTAGCACTAGCTAAAGGTCCGCTTGTTGAAGACCATGTGCTGATACTACCAGTTGAGCATATGCCAAGTACCTTATCTCTGTCTTCTGAATCTGAAGTTGAGCTCTTAGGGTTTCAGAACAGTCTCAATAGATATTACAAGAACCAAGAAAAGGAAGTAATCTTTTTTGAGCTGGCTTCCATACGTGGCACTCATGCCAATCTTCAGGTCATTCCCATTCCATCTCCCAAAGCATTTTTGGTTGAAAAAGCGTTCAATTTAGCTGCACAAAAGTTGGGATTTAAATTTGTGGTGAAGAAATTCGATAGCATTTCCGATGGAAGAAAGTTTTTGAAGACACAAATTGATGGGAATTCAAGCTTGTTCTATGTTGAAGTCCCAGGAGGCACAATTCTGCTGCATCATGTTGAGGAGAAAGAGATATTTCCTGCCCAATTTGGACGTGAGGTTCTGGCGGGGTTGCTTAATATGGCAGATAATGCAGATTGGAGAAATTGCAAACATAACAAAGAGGAAGAGATGAAAATTGTTGAAGATTTCAAGAACCGATTTCAAGAATATGATCCAAGCCATTGA 1752 0.4338 MAPRILLCGDVFGRFNQLFKRVSSVNKSAGPFDALLCVGQFFPDSPEQLDDFMAYIEGGSHIPLPTYFIGDYGVAAPKVLLAASKDSANRGFKMDGLKVCDNLYWLKGSGKFNLFGLSVTYLSGRKSSTVQQFGTYSQDDVDALRAIAEEPGVVDLFLTYPYSTGSDSTISDLVQEIKPRYHIAGSKGIYYAREPYSNVDAVHVTRFIGLASVGNRDKQKFIHAISPTPASTMSSTEIAMKTTNTTLSPYTSAEKKASPNDTVKRSSDGISDSQHWRYDVSQKRQKHEAGDKMCFKFVSSGSCPRGEQCNYRHDTDAREHCMRGVCFDFLNKGKCERGPDCSFRHSLQDEGDRDPSRKRGSENTRPSRECWFCLSSSNVESHLIISIGENYYLALAKGPLVEDHVLILPVEHMPSTLSLSSESEVELLGFQNSLNRYYKNQEKEVIFFELASIRGTHANLQVIPIPSPKAFLVEKAFNLAAQKLGFKFVVKKFDSISDGRKFLKTQIDGNSSLFYVEVPGGTILLHHVEEKEIFPAQFGREVLAGLLNMADNADWRNCKHNKEEEMKIVEDFKNRFQEYDPSH 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00322 583 PANTHER CWF19-LIKE PROTEIN 1 1 582 - -
Car07g00322 583 MobiDBLite consensus disorder prediction 346 365 - -
Car07g00322 583 Gene3D - 348 478 IPR036265 -
Car07g00322 583 Pfam Protein similar to CwfJ C-terminus 2 492 580 IPR006767 -
Car07g00322 583 ProSiteProfiles Zinc finger C3H1-type profile. 325 348 IPR000571 GO:0046872
Car07g00322 583 SUPERFAMILY HIT-like 369 466 IPR036265 -
Car07g00322 583 Pfam Protein similar to CwfJ C-terminus 1 359 475 IPR006768 -
Car07g00322 583 MobiDBLite consensus disorder prediction 244 271 - -
Car07g00322 583 CDD MPP_CWF19_N 6 213 - -
Car07g00322 583 SUPERFAMILY CCCH zinc finger 291 317 IPR036855 GO:0046872
Car07g00322 583 ProSiteProfiles Zinc finger C3H1-type profile. 288 316 IPR000571 GO:0046872
Car07g00322 583 PANTHER CWF19, CELL CYCLE CONTROL PROTEIN 1 582 IPR040194 -
Car07g00322 583 SMART c3hfinal6 322 347 IPR000571 GO:0046872
Car07g00322 583 SMART c3hfinal6 290 315 IPR000571 GO:0046872
Car07g00322 583 Gene3D - 277 347 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Car07g00322 CwfJ_C_1 2.4e-37 CL0265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00322 K24939 - gmx:100782106 991.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00322 07 2917683 2922670 Car07g00322 07 2917683 2922670 ECH