Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00319 ATGATTCCATCACCACCTTATCACCATTCACTATCTCTGGATCTTAATCAAGATCATCATTACCATCAATTTTCTACTCCACACCATCACACTTCATCATTTTCTTCATATCCCCCAAATTATATTGAAGAGGTTGAGAAGATGATTCCTTCAACTGCAGAAAAGCATGACAGCAGAAGCATGAAACAGAAACTGACAATTCGATGGAAAAAAGAAGAAAGTGATGAAATGAATAATAATATTGAATCAGTTGAGAGTGCGGATACAAAGATGATAGATTCTGATGACGTACCAAATAAAAAGCAATTAGAAGTGTCACCGGTAGGAAGAGATAATagcagcagcagcagcaacaacaATTATTCAACTACTCCAACTGTTAGGGTTTGTTCTGATTGCAACACCACTAAGACCCCTCTTTGGAGAAGTGGACCAAAAGGCCCCAAGACACTTTGCAACGCTTGTGGGATTAGACAAAGGAAGGCTCGACGTGCTATggcggcggcggcagcagcagcggcAAATGGTGTGATGACAGTTGATAAGACATCATCTGTGAAGCAAAATAAGTTGCAGAAAAAAGAGAATAAGTCCAAAATTCATCACTCTTCAAAAGTACCACATATGAAAAAGAAGCGCAAGGTTGAAACTAAACCATCTCAAACTACAAACAATTTTAGTTTCGAGGATTTTACATTAATGTTGAGTAACAATTTGGCTGTTCAACAAGTTTTCCCTCAGGATGAGAAGGAGGCTGCTATCTTGCTCATGGCATTATCTTATGGATTAGTCCACGGTTAA 801 0.3521 MIPSPPYHHSLSLDLNQDHHYHQFSTPHHHTSSFSSYPPNYIEEVEKMIPSTAEKHDSRSMKQKLTIRWKKEESDEMNNNIESVESADTKMIDSDDVPNKKQLEVSPVGRDNSSSSSNNNYSTTPTVRVCSDCNTTKTPLWRSGPKGPKTLCNACGIRQRKARRAMAAAAAAAANGVMTVDKTSSVKQNKLQKKENKSKIHHSSKVPHMKKKRKVETKPSQTTNNFSFEDFTLMLSNNLAVQQVFPQDEKEAAILLMALSYGLVHG 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00319 266 CDD ZnF_GATA 129 161 IPR000679 GO:0006355|GO:0043565
Car07g00319 266 MobiDBLite consensus disorder prediction 192 222 - -
Car07g00319 266 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 124 164 - -
Car07g00319 266 MobiDBLite consensus disorder prediction 194 215 - -
Car07g00319 266 ProSiteProfiles GATA-type zinc finger domain profile. 128 160 IPR000679 GO:0006355|GO:0043565
Car07g00319 266 Gene3D - 125 169 IPR013088 GO:0006355|GO:0008270
Car07g00319 266 MobiDBLite consensus disorder prediction 106 124 - -
Car07g00319 266 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 54 266 - -
Car07g00319 266 MobiDBLite consensus disorder prediction 51 124 - -
Car07g00319 266 Pfam GATA zinc finger 130 163 IPR000679 GO:0006355|GO:0043565
Car07g00319 266 ProSitePatterns GATA-type zinc finger domain. 130 155 IPR000679 GO:0006355|GO:0043565
Car07g00319 266 PANTHER GATA TRANSCRIPTION FACTOR 21-LIKE 54 266 - -
Car07g00319 266 MobiDBLite consensus disorder prediction 51 78 - -
Car07g00319 266 SMART GATA_3 124 175 IPR000679 GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00319 113 266 C2C2-Gata Transcription Factor Family AT4G26150 41.011 2.41e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Car07g00319 GATA 8.9e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00319 - - cam:101491168 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00319 07 2888350 2890053 Car07g00319 07 2888350 2890053 ECH