Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00314 ATGTTAATATCGACCAATACGGCTGAATTTGAACAACATGAACTAATTCAACCACAACACTTGTTATGTCCCAAACAATGCCTCGAAGAATATTACTCCAACTCCAAGTGTGATGTGGCAGAGACACCTTCTTCTTCCCCTGCGAGCTCTTCCTCTTCGTCGCGCCACGTCCCGGGAGCTTTGTTCTTTTTCCTTGGAGGGATTGTAGTACTCATTATATTGCTCATTCTTCTCTTTGTATTTTGGAAGCATGTTAAACGTGATCCACTAGAACAATTACCGGAGAAGACAGCTTCACCACCGAGTCACACTCATAAACATGAAGAGGTGATGAAGACGATTGTCCCAACTAATCAACAGTCAGGATTCATGGAGTTCATTAGTGGAAACCTTCGGACAATTAGCTACTTTGATTTCCAGACACTGAGGAAAGCCACCAAGAATTTCCATCGCAGAAATCTTCTTGGAAGTGGTGGATTTGGCCCTGTCTATCAGGGAAAGTTAGCAGATGGAAGGCTAGTTGCTTGTAAGAAATTGTCTcttgataaatctcaccaaggagaaagagaatttctagcagaagtgagaatgatcacaagcattcaacacaaaaatctggttcgccttctaggatgttgctcggacggacctcaaaggatacttgtctatgaatacatgAAGAACAGAAGTTTGGACCTCTTCATACATGGAAACagtgatcaatttctaaattggagtactagatttcaaataattcttggagtagcgcgtggattgcaatacctccatgaggattcgcatgtaagaattgttcatcgcgatatcaaagcaagcaacattcttcttgacggaaagtttcaaccgaggatcggtgattttgggctagctagattcttcccTGAAGATCAAGCTTACCTTAGCACTCAGTTTGCTGGAACATTAGGTTATACAGCTCCTGAATATGCTATTAGAGGAGAACTTTCTGAAAAGGCAGACATCTATAGTTTTGGAGTACTTGTGCTTGAAATCATCAGCTGTAGGAAAAATACAGATCTCAATTTACCATCAGATATGCAGTACCTTCCTGAATATGCATGGAAACTTTATGAAAAGTCAATGGTGATGGATCTTATAGATCCAAAACTAAGAGAAGAAGGATTCGTAGAAAAGGATGTTATGCAAGCATTCCACGTGGCATTCTTATGTCTTCAGCCTCATCCAGATTTGAGACCTGCCATGTCACAGATTGTAGCATTGTTAACATTTAAAATTGATATGGTAACAACACCAATgaggccagctttccttgatagaagacgtgtaatggatgatgaaaaccattcttgggAAGTTATATCTGAAGCTTTACAAACTCCTGTGGCCAGTGCTTCTATGTCCTAA 1401 0.2948 MLISTNTAEFEQHELIQPQHLLCPKQCLEEYYSNSKCDVAETPSSSPASSSSSSRHVPGALFFFLGGIVVLIILLILLFVFWKHVKRDPLEQLPEKTASPPSHTHKHEEVMKTIVPTNQQSGFMEFISGNLRTISYFDFQTLRKATKNFHRRNLLGSGGFGPVYQGKLADGRLVACKKLSLDKSHQGEREFLAEVRMITSIQHKNLVRLLGCCSDGPQRILVYEYMKNRSLDLFIHGNSDQFLNWSTRFQIILGVARGLQYLHEDSHVRIVHRDIKASNILLDGKFQPRIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLNLPSDMQYLPEYAWKLYEKSMVMDLIDPKLREEGFVEKDVMQAFHVAFLCLQPHPDLRPAMSQIVALLTFKIDMVTTPMRPAFLDRRRVMDDENHSWEVISEALQTPVASASMS 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00314 466 SMART serkin_6 149 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00314 466 Gene3D Phosphorylase Kinase; domain 1 110 225 - -
Car07g00314 466 SUPERFAMILY Protein kinase-like (PK-like) 131 423 IPR011009 -
Car07g00314 466 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 127 435 - -
Car07g00314 466 ProSiteProfiles Protein kinase domain profile. 149 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00314 466 Pfam Protein tyrosine and serine/threonine kinase 152 419 IPR001245 GO:0004672|GO:0006468
Car07g00314 466 Gene3D Transferase(Phosphotransferase) domain 1 226 428 - -
Car07g00314 466 CDD STKc_IRAK 155 421 - -
Car07g00314 466 PANTHER RECEPTOR-LIKE KINASE 127 435 - -
Car07g00314 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00314 Car-Chr7 2848425 2851803 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00314 137 436 Receptor kinase-like Gene Family AT1G56120 49.333 3.50e-98 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car07g00314 PK_Tyr_Ser-Thr 4.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00314 - - ccaj:109792436 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00314 07 2848425 2851803 Car01g01181 01 14059575 14063986 PCT