Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00311 ATGGAAAATGATGATGAATATTGTAATACAGGGCTATGTCTTGGATTAGGAATGGGAGGACACGTGGCACGAAAAGAGAAGAAACAAAAATTAGAAGTGAAGAACCCTTTGGTGGCTTGTTTCGACCTAGCTTTTGAGCTTTGTCCAAAAGGAGAAGACATGaacatcaataacaacaacaataataataaTGAAAGATTCAGTTTGGAGAGACAATATTATCCAAATGCAATTACTTGCAGCACCGATTCCGATaacaacatcaacaacaacaacgacaacGATCGAAGAAAGAAACTGAGGCTTACAAAGGATCAATCAGCTATGCTTGAGAACACCTTTAAGCTCCATAACACTCTTAATCCTGTCCAGAAACAAGCACTTGCTGACCAATTGAATTTAAAGACTAGACAAATTGAAGTTTGGTTTCAGAACAGGAGAGCAAGGACGAAGTTGAAGCAGACAGAAGTGGACTATGAGTTGTTGAAAAAGCATTGTCAAAATCTAAGCGATGAGAACAAAAGGTTGAAGAAGGAATTACAGGAATTCAAAGTTGAACAAACACCGTTACGAATTCAACGTCTATCAAAAGTCACTCTCTGCTCTTCCTGCGATAAACTGTTGAACCGCAAAGAAGATAATTGA 645 0.355 MENDDEYCNTGLCLGLGMGGHVARKEKKQKLEVKNPLVACFDLAFELCPKGEDMNINNNNNNNNERFSLERQYYPNAITCSTDSDNNINNNNDNDRRKKLRLTKDQSAMLENTFKLHNTLNPVQKQALADQLNLKTRQIEVWFQNRRARTKLKQTEVDYELLKKHCQNLSDENKRLKKELQEFKVEQTPLRIQRLSKVTLCSSCDKLLNRKEDN 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00311 214 SMART HOX_1 95 157 IPR001356 GO:0003677
Car07g00311 214 Pfam Homeodomain 96 151 IPR001356 GO:0003677
Car07g00311 214 Pfam Homeobox associated leucine zipper 153 184 IPR003106 GO:0006355|GO:0043565
Car07g00311 214 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 8 207 - -
Car07g00311 214 Gene3D - 89 158 - -
Car07g00311 214 SUPERFAMILY Homeodomain-like 80 154 IPR009057 -
Car07g00311 214 SMART halz 153 195 IPR003106 GO:0006355|GO:0043565
Car07g00311 214 ProSiteProfiles 'Homeobox' domain profile. 93 153 IPR001356 GO:0003677
Car07g00311 214 CDD homeodomain 96 154 IPR001356 GO:0003677
Car07g00311 214 ProSitePatterns 'Homeobox' domain signature. 128 151 IPR017970 GO:0000981|GO:0006355
Car07g00311 214 PANTHER - 8 207 - -
Car07g00311 214 Coils Coil 145 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00311 Car-Chr7 2828107 2829761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00311 5 207 Homeobox Transcription Factor Family AT4G37790 41.772 1.35e-45 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Car07g00311 Homeodomain 8.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00311 K09338 - gmx:100812222 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00311 07 2828107 2829761 Car01g01180 01 14023451 14025481 PCT