Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00307 ATGGGGAACTGTAACTGTTTGAGTCTTCAACCAGACGACAATCCCGCCCCTGCCTCTGAAACCAACAATCTATCAGGGAGAAGTATTCGGTTATCTGCTGGTCTCAGCAACTTGAGATTGATACAGAATGGCAATTCCACATCTCTTGGGCGTAGCAGCAACTCTGGAAGAAATAGCAGACTATTTAGTAGTAGTAATAATCACTCAACAGGCAATAATACAAGTACATCCTTTTGGGGCTCTGAGAATAGTCAGGCCTCTCGAGTAAGAGATGATGAGGAGTTCCCTTATGGGCAGATCTTGGATGCGGCAAACTTGAAAGTTTTTACTTTGGCAGAACTGAAGGAAGCCACTAAAAATTTCCGTCTTGACAGTGTGTTAGGAGAGGGTGGGTTCGGTAGAGTATTCAAGGGTTTGATTAAGAAGAGTTCGGGATCAAAAAGAGGTGAGGGTTTGACTATTGCCATCAAGAAATTGAATTCTGAAAGCAGGCAAGGAGTTGCAGAATGGCAGTCAGAGGTGAATTTCTTAGGAAGGCTTTCTCACCCCAACCTTGTAAAGCTGTTGGGATTTGGGCGTGAGGATGGCGAGCTATTTTTGGTGTATGAATTTATGCACCGTGGCAGCTTGGATAACCACCTGTTTGGAAGAGGTTCAAATGTTCGGCCACTTTCATGGGACAGAAGGTTGAAAGTGATGATAGGAGCAGCTAGGGGACTAAATTTCCTGCACTCCTTAGAGAAGAAAATTATATACAGAGATTTTAAGCCCTCAAATATACTACTTGACAAGGCATACACATCCAAGTTATCAGACTTTGGCTTGGCCAGATCTGTTCCTTCTGATGATCACACTCATGTATCAACACAGGTAGTGGGAACATGCGGCTATGCTGCTCCAGAGTACATTCGCACAGGTAAACCGCAAATTCCCTCTTCTTAA 942 0.4395 MGNCNCLSLQPDDNPAPASETNNLSGRSIRLSAGLSNLRLIQNGNSTSLGRSSNSGRNSRLFSSSNNHSTGNNTSTSFWGSENSQASRVRDDEEFPYGQILDAANLKVFTLAELKEATKNFRLDSVLGEGGFGRVFKGLIKKSSGSKRGEGLTIAIKKLNSESRQGVAEWQSEVNFLGRLSHPNLVKLLGFGREDGELFLVYEFMHRGSLDNHLFGRGSNVRPLSWDRRLKVMIGAARGLNFLHSLEKKIIYRDFKPSNILLDKAYTSKLSDFGLARSVPSDDHTHVSTQVVGTCGYAAPEYIRTGKPQIPSS 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00307 313 Gene3D Transferase(Phosphotransferase) domain 1 205 312 - -
Car07g00307 313 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Car07g00307 313 Pfam Protein kinase domain 123 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00307 313 ProSitePatterns Protein kinases ATP-binding region signature. 127 158 IPR017441 GO:0005524
Car07g00307 313 PANTHER OS01G0588500 PROTEIN-RELATED 17 308 - -
Car07g00307 313 Gene3D Phosphorylase Kinase; domain 1 105 204 - -
Car07g00307 313 MobiDBLite consensus disorder prediction 44 85 - -
Car07g00307 313 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-RLCK-VIIA-2 FAMILY-RELATED 17 308 - -
Car07g00307 313 SUPERFAMILY Protein kinase-like (PK-like) 102 307 IPR011009 -
Car07g00307 313 MobiDBLite consensus disorder prediction 1 24 - -
Car07g00307 313 ProSiteProfiles Protein kinase domain profile. 121 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00307 Car-Chr7 2787778 2791724 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00307 57 307 Glycoside Hydrolase AT3G07070 41.270 1.12e-57 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Car07g00307 Pkinase 2.7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00307 - - gmx:100813304 429.483