Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car07g00306 | ATGATGGTTGATTCCACAATGATTCAAAAGATGAGAATGGAAGAACAGATAGCTATACAAGAAGCTGCTTCTGCTGGGTTGAAAAGCATGGAGCATCTAATTCGTGTTATCGCTTCTCAAATCCcttcttcttcgtcttcatcttcatcttcttcAAATCACCGTAACAAACTCGATCTGGTGAATAATCTTGACTGCACAGAAATAACTGATTTCACTGTCTCGAAGTTCAAACAGGTTATTAACTTGTTAAATCGTACTGGTCACGCTCGATTTCGTCGCGCACCTTCTTCAAAACCTCAACTTCAACCAGAGAAATTAAACCCTCAAACACAGTCAACGAATCTTGATTTTGCAAAGCCAAATCAAGTAGTTAGGTCAAATCCAAATCCCAAACCTAAATCTACAGATTTATCTGTTTCTCAATTCTCTAAATCGAAGGAAACCTATAGCGTCTCCACCACCACTTCTTCCTTCCTCTCCACCATCACCGGAGACGGAAGCGTTTCCGACGGTAAAATAGGACCTATTATTTCCTCCGGTAAGCCTCCACTCGCTTCAACTCACCGGAAAAGGTGTCACGATGCAATTTCTTCCGGTAAAGTATCGTCCTCCGGCCAGTGTCATTGCTCCAAGAGAAGGAAATCGCGTGTGAAAAGAACAATTCGAGTGCCGGCGATAAGTTCAAGAGTCGCTGATATTCCAGCAGATGAATTTTCATGGAGAAAATACGGTCAAAAGCCAATCAAAGGTTCACCGTATCCACGGTAA | 771 | 0.4073 | MMVDSTMIQKMRMEEQIAIQEAASAGLKSMEHLIRVIASQIPSSSSSSSSSSNHRNKLDLVNNLDCTEITDFTVSKFKQVINLLNRTGHARFRRAPSSKPQLQPEKLNPQTQSTNLDFAKPNQVVRSNPNPKPKSTDLSVSQFSKSKETYSVSTTTSSFLSTITGDGSVSDGKIGPIISSGKPPLASTHRKRCHDAISSGKVSSSGQCHCSKRRKSRVKRTIRVPAISSRVADIPADEFSWRKYGQKPIKGSPYPR | 256 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car07g00306 | 256 | Pfam | WRKY DNA -binding domain | 237 | 256 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Car07g00306 | 256 | SUPERFAMILY | WRKY DNA-binding domain | 233 | 256 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Car07g00306 | 256 | MobiDBLite | consensus disorder prediction | 91 | 143 | - | - | |
Car07g00306 | 256 | PANTHER | TRANSCRIPTION FACTOR WRKY FAMILY-RELATED | 9 | 256 | - | - | |
Car07g00306 | 256 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 9 | 256 | IPR044810 | GO:0003700 | |
Car07g00306 | 256 | Pfam | Plant zinc cluster domain | 190 | 233 | IPR018872 | - | |
Car07g00306 | 256 | MobiDBLite | consensus disorder prediction | 170 | 189 | - | - | |
Car07g00306 | 256 | MobiDBLite | consensus disorder prediction | 101 | 143 | - | - | |
Car07g00306 | 256 | Gene3D | WRKY domain | 214 | 256 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Car07g00306 | 256 | ProSiteProfiles | WRKY domain profile. | 230 | 256 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car07g00306 | Car-Chr7 | 2768127 | 2770088 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car07g00306 | 1 | 256 | WRKY Transcription Factor Family | AT4G31550 | 49.492 | 2.11e-76 | 231 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Car07g00306 | Plant_zn_clust | 1.4e-17 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car07g00306 | - | - | gmx:732589 | 331.257 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Car07g00306 | 07 | 2768127 | 2770088 | Car01g01173 | 01 | 13879334 | 13880997 | PCT |