Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00292 ATGTCTTCGTGTTTGAGTGGAACAGGGGGAAGAACCTACGGTCTAGATTTAGATATAGTTAAATCTCCACCATGTTCATGGAGTCGAACATCACAAACACAAACCTCTTCTTCTCCTTCCTCAACCATCTCAGAATCAACCAATTCACCACTCACAATCTCCACCACAAAACCAAGAACCCCTCGAAAACGACCCAACCAAACCTACAACGAAGCCGCAACACTCCTTTCAACAGCTTACCCGAACCTATTCTCCAACCCAAACCTAAAATCACACACCAATCATAGCAACAATAATAAATTCACTAAACTACCATCATCAGAAAAAACGTACGAATCAGATTCCTCACAACTTCTTTTACCTTTCAGAGTTTTCGACACGTCATCATCTTTTTTACTTCACGGCCCACTCCAAAATCACAGACCCAATTTCCCGTCTGAGCCCAAACCGGTCAAACCGTGTCACTGTCAGAGTCCCGGAGAGATAAGTTCAATGGTCAATTCCCTCGAATTGAACGATGATATTGATTTCGACACTGAATCCATTCTCGACGAAGAAATCGAACAAGGAATCGATAGTATCATGGGAAGTACAGTCCAAGAAGAGGAAGATTCTAACGCCGTTTCTTCTCATCATCCATGGATTGGTTTTGGCGGGAAATTCGATTTCCGATTAGGTTTACAGAGAACTGGTGTGAGAGCTCTTCGTCATGTTGATGAAGGAAATTGGTGGAATTTTCCTGCTGTTGATATTCTTAAAATTTCGCCGAAAATTTGCAGTGTCGGTGAGAAATCGGCGGCGCCGGTGACGGACAAGAAGAAAAAGAAGAAGGTTGTTACGGTGGAGAAACACAACGAGGAGTTGTTGAAAGAAACGGAATTGCCAAAAAGGAAAACCGGTTTGTTGTTGAAATTGAATTACGAAGGCGTTCGGAATGCTTGGTCTGATAAAGGAACACCGTTCGCTGACGACAGTCCTATCTCCGACGCACCGGGAAATGACGTCAATGCACGGCTGTCACAAATTGATTTGTTGTGGGACAATGGAGTTGGAGGTGTGAGAGAAGCTAGCGTGCTACGTTACAAAGAAAAACGGCGTACGCGTCTCTTCTCTAAGAAGATCAGATATCAGGTCAGAAAAGTCAACGCAGATCGACGGCCAAGAATGAAGGGGCGATTTGTTAGGAGGCTGAATGCTAGCTAA 1203 0.4406 MSSCLSGTGGRTYGLDLDIVKSPPCSWSRTSQTQTSSSPSSTISESTNSPLTISTTKPRTPRKRPNQTYNEAATLLSTAYPNLFSNPNLKSHTNHSNNNKFTKLPSSEKTYESDSSQLLLPFRVFDTSSSFLLHGPLQNHRPNFPSEPKPVKPCHCQSPGEISSMVNSLELNDDIDFDTESILDEEIEQGIDSIMGSTVQEEEDSNAVSSHHPWIGFGGKFDFRLGLQRTGVRALRHVDEGNWWNFPAVDILKISPKICSVGEKSAAPVTDKKKKKKVVTVEKHNEELLKETELPKRKTGLLLKLNYEGVRNAWSDKGTPFADDSPISDAPGNDVNARLSQIDLLWDNGVGGVREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRRLNAS 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00292 400 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 399 - -
Car07g00292 400 PANTHER OS02G0148000 PROTEIN 1 399 - -
Car07g00292 400 MobiDBLite consensus disorder prediction 85 108 - -
Car07g00292 400 Pfam CCT motif 354 395 IPR010402 GO:0005515
Car07g00292 400 ProSiteProfiles CCT domain profile. 354 396 IPR010402 GO:0005515
Car07g00292 400 MobiDBLite consensus disorder prediction 25 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00292 Car-Chr7 2640575 2644204 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00292 281 396 C2C2-CO-like Transcription Factor Family AT1G25440 45.038 1.32e-21 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car07g00292 CCT 7.6e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00292 - - aprc:113845796 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00292 07 2640575 2644204 Car01g01152 01 11910200 11911316 PCT